RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 hCG_1642624A0A1W2PR95 340 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 DGKIO75912 1065 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 MMP1P03956 469 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 LINC00271P0C7V0 271 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 INSRRP14616 1297 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CD52P31358 61 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 AK2P54819 239 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ZP2Q05996 745 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 HYAL1Q12794 435 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 KRT32Q14532 448 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 NBR1Q14596 966 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 SYNE3Q6ZMZ3 975 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 TMTC3Q6ZXV5 915 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 HEATR3Q7Z4Q2 680 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 RAB11FIP4Q86YS3 637 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ADHFE1Q8IWW8 467 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CMTR2Q8IYT2 770 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CCDC82Q8N4S0 544 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 FANCBQ8NB91 859 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PPP2R3CQ969Q6 453 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 SDF4Q9BRK5 362 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 FTHL17Q9BXU8 183 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 AGO3Q9H9G7 860 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 SLC9A2Q9UBY0 812 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 TRPC6Q9Y210 931 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 TRPV2Q9Y5S1 764 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 TTC3P53804 2025 aa11.06□□□□□ -0.64
CDK5RAP3-227ENST00000583352 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CSPG5O95196 566 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 STAG3L1P0CL83 205 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 RPS6KB1P23443 525 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 LTBRP36941 435 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CLUL1Q15846 466 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CTC1Q2NKJ3 1217 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 NAALADL2Q58DX5 795 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 MICU3Q86XE3 530 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 NPAS4Q8IUM7 802 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 LINC01599Q8WXQ3 324 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 P2RX5Q93086 422 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ZBTB10Q96DT7 871 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ZSCAN31Q96LW9 406 aaPredicted RBP11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PCYT2Q99447 389 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 POP1Q99575 1024 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 MXRA8Q9BRK3 442 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 IGFLR1Q9H665 355 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 KCNH7Q9NS40 1196 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PCDHA2Q9Y5H9 948 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 MRPL42Q9Y6G3 142 aaKnown RBP11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ATG2AQ2TAZ0 1938 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 NFASCO94856 1347 aa11.05□□□□□ -0.64
CDK5RAP3-227ENST00000583352 POTEB3A0JP26 581 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 MBTPS2O43462 519 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 FOSP01100 380 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 HSP90AA1P07900 732 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 STAT5BP51692 787 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 NAPAP54920 295 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ACTR2P61160 394 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 EXOSC10Q01780 885 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 TMEM62Q0P6H9 643 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PAK2Q13177 524 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 SMAD4Q13485 552 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PLCB4Q15147 1175 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 SMAD2Q15796 467 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PPP1R18Q6NYC8 613 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 POTEBQ6S5H4 581 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PLPPR4Q7Z2D5 763 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 RTN4RL1Q86UN2 441 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 SGMS1Q86VZ5 419 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 TEX2Q8IWB9 1127 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 NEK1Q96PY6 1258 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 LRRC2Q9BYS8 371 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CELF4Q9BZC1 486 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ALG13Q9NP73 1137 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 RBM28Q9NW13 759 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CD207Q9UJ71 328 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 LRFN2Q9ULH4 789 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PADI3Q9ULW8 664 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PLAGL2Q9UPG8 496 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 IGSF9BQ9UPX0 1349 aa11.04□□□□□ -0.64
CDK5RAP3-227ENST00000583352 SMIM35A0A1B0GVV1 85 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 hCG_1984214I3L0E3 225 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 TBX10O75333 385 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ITGB1P05556 798 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ARP10275 920 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 SCG2P13521 617 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 GTF2F1P35269 517 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 IRS1P35568 1242 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 NDUFV1P49821 464 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 SLC26A2P50443 739 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ADCY7P51828 1080 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 KRT76Q01546 638 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 DLX2Q07687 328 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 ADAM15Q13444 863 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 PAN2Q504Q3 1202 aaKnown RBP11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CEP55Q53EZ4 464 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 WWC2Q6AWC2 1192 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 BLOC1S2Q6QNY1 142 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 CLEC17AQ6ZS10 378 aa11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 FAM43BQ6ZT52 329 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-227ENST00000583352 NME8Q8N427 588 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms