RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ALG1L2C9J202 215 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 CYP17A1P05093 508 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 TMEM253P0C7T8 217 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 PFKLP17858 780 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 SDHAP31040 664 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 SMAD3P84022 425 aaKnown RBP7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 DBPQ10586 325 aaPredicted RBP7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 SMAD2Q15796 467 aaKnown RBP7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 ESRP1Q6NXG1 681 aaKnown RBP7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 FERMT3Q86UX7 667 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 LRRC56Q8IYG6 542 aaPredicted RBP7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 HIPK4Q8NE63 616 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 ASB15Q8WXK1 588 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 RNF38Q9H0F5 515 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 ZMAT4Q9H898 229 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 GCM1Q9NP62 436 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 VTA1Q9NP79 307 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 UCKL1Q9NWZ5 548 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 WASF3Q9UPY6 502 aa7.68□□□□□ -1.18
SMARCE1-219ENST00000583294 PRAMEF22A3QJZ6 481 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 RAB11FIP3O75154 756 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 PRKD3O94806 890 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 CYP2C8P10632 490 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 MC4RP32245 332 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 HERVK_113P62684 666 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 ITKQ08881 620 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 TERF2Q15554 542 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 BRDTQ58F21 947 aaPredicted RBP7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 PHF19Q5T6S3 580 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 PRAMEF18Q5VWM3 479 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 LIPIQ6XZB0 460 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 LCNL1Q6ZST4 164 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 PROSER1Q86XN7 944 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 IGDCC3Q8IVU1 814 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 CLRN3Q8NCR9 226 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 RTF1Q92541 710 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 SCYL1Q96KG9 808 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 TRIM8Q9BZR9 551 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 NGRNQ9NPE2 291 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 WASHC2CQ9Y4E1 1318 aa7.67□□□□□ -1.18
SMARCE1-219ENST00000583294 NPIPB6E9PJ23 425 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 ETV2O00321 342 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 N4BP3O15049 544 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 SEMA7AO75326 666 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 ULK1O75385 1050 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 ENO2P09104 434 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 HSP90B1P14625 803 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 LSP1P33241 339 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 LIMS1P48059 325 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 DLG4P78352 724 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 PFKPQ01813 784 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 KRTAP19-4Q3LI73 84 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 VASNQ6EMK4 673 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 ATG14Q6ZNE5 492 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 NECAB2Q7Z6G3 386 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 B3GNT8Q7Z7M8 397 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 CNTD1Q8N815 330 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 MTMR8Q96EF0 704 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 C16orf92Q96LL3 132 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 CCDC8Q9H0W5 538 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 BTBD7Q9P203 1132 aa7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 NOC2LQ9Y3T9 749 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-219ENST00000583294 CD40P25942 277 aa7.65□□□□□ -1.18
SMARCE1-219ENST00000583294 AOAHP28039 575 aa7.65□□□□□ -1.18
SMARCE1-219ENST00000583294 THBS2P35442 1172 aa7.65□□□□□ -1.18
SMARCE1-219ENST00000583294 FNTBP49356 437 aa7.65□□□□□ -1.18
SMARCE1-219ENST00000583294 SESN3P58005 492 aa7.65□□□□□ -1.18
SMARCE1-219ENST00000583294 FOXO4P98177 505 aa7.65□□□□□ -1.18
SMARCE1-219ENST00000583294 MTMR1Q13613 665 aa7.65□□□□□ -1.18
SMARCE1-219ENST00000583294 ZSCAN18Q8TBC5 510 aaPredicted RBP7.65□□□□□ -1.18
SMARCE1-219ENST00000583294 NOX5Q96PH1 765 aa7.65□□□□□ -1.18
SMARCE1-219ENST00000583294 GORASP1Q9BQQ3 440 aa7.65□□□□□ -1.18
SMARCE1-219ENST00000583294 HSPBP1Q9NZL4 362 aa7.65□□□□□ -1.18
SMARCE1-219ENST00000583294 ZNF839A8K0R7 811 aa7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 GOLGA6L22H0YM25 854 aa7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 PDGFRBP09619 1106 aa7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 ZSCAN22P10073 491 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 PTGS1P23219 599 aa7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 IGFBP6P24592 240 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 GLRBP48167 497 aa7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 PHC1P78364 1004 aa7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 EPHA7Q15375 998 aa7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 ZZZ3Q8IYH5 903 aa7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 ZNF610Q8N9Z0 462 aa7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 FOXRED1Q96CU9 486 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 ZSWIM3Q96MP5 696 aa7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 PUS7LQ9H0K6 701 aaKnown RBP7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 TOPORSQ9NS56 1045 aaPredicted RBP7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 MSRAQ9UJ68 235 aa7.64□□□□□ -1.19
SMARCE1-219ENST00000583294 LRRC32Q14392 662 aa7.63□□□□□ -1.19
SMARCE1-219ENST00000583294 KCNA10Q16322 511 aa7.63□□□□□ -1.19
SMARCE1-219ENST00000583294 SKIDA1Q1XH10 827 aa7.63□□□□□ -1.19
SMARCE1-219ENST00000583294 LRSAM1Q6UWE0 723 aa7.63□□□□□ -1.19
SMARCE1-219ENST00000583294 RTN4RL1Q86UN2 441 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-219ENST00000583294 RASSF3Q86WH2 238 aa7.63□□□□□ -1.19
SMARCE1-219ENST00000583294 CMIPQ8IY22 773 aa7.63□□□□□ -1.19
SMARCE1-219ENST00000583294 AHCYL2Q96HN2 611 aaKnown RBP7.63□□□□□ -1.19
SMARCE1-219ENST00000583294 ZNF496Q96IT1 587 aaPredicted RBP7.63□□□□□ -1.19
SMARCE1-219ENST00000583294 TUBGCP5Q96RT8 1024 aa7.63□□□□□ -1.19
SMARCE1-219ENST00000583294 SMAD5Q99717 465 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms