RNA–Protein interactions for RNA: ENST00000583085.1

STRADA-222, Transcript of STE20-related kinase adaptor alpha, human

Gene STRADA, Length 3,685 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-222	ENST00000583085	FAM170A	A1A519	330 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	CETN3	O15182	167 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	IPO7	O95373	1038 aa	Known RBP	13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	RHOXF2B	P0C7M4	288 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	VCAM1	P19320	739 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	SLC9A1	P19634	815 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	PDXDC1	Q6P996	788 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	DLK2	Q6UY11	383 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	CCDC170	Q8IYT3	715 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	NOA1	Q8NC60	698 aa	Known RBP	13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	GOLGA1	Q92805	767 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	RHOXF2	Q9BQY4	288 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	IFIH1	Q9BYX4	1025 aa	Known RBP	13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	VPS33B	Q9H267	617 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	MYO6	Q9UM54	1294 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	PCDHB13	Q9Y5F0	798 aa		13.38	□□□□□ -0.27
STRADA-222	ENST00000583085	ZNF185	O15231	689 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	AKR1B10	O60218	316 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	TNIP1	Q15025	636 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	R3HDM1	Q15032	1099 aa	Known RBP	13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	TDRD12	Q587J7	1177 aa	Known RBP	13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	TCERG1L	Q5VWI1	586 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	HGSNAT	Q68CP4	663 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	DNAAF5	Q86Y56	855 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	TAAR1	Q96RJ0	339 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	MXRA8	Q9BRK3	442 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	SALL4	Q9UJQ4	1053 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	CAPN6	Q9Y6Q1	641 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	FAM13A	O94988	1023 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	HNRNPH3	P31942	346 aa	Known RBP	13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	HSD17B4	P51659	736 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	ZNF280A	P59817	542 aa	Predicted RBP	13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	MRPS9	P82933	396 aa	Known RBP	13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	ITGB3BP	Q13352	177 aa	Predicted RBP	13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	PCDHA13	Q9Y5I0	950 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	KRT86	O43790	486 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	PLA2G6	O60733	806 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	EPS15	P42566	896 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	PRKG1	Q13976	671 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	SPA17	Q15506	151 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	PNKP	Q96T60	521 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	RIPK3	Q9Y572	518 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	FHOD1	Q9Y613	1164 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	ZMYM2	Q9UBW7	1377 aa		13.37	□□□□□ -0.27
STRADA-222	ENST00000583085	TGFB1I1	O43294	461 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	MOCS3	O95396	460 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	NR3C1	P04150	777 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	MYCL	P12524	364 aa	Predicted RBP	13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	RPS6	P62753	249 aa	Known RBP	13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	PSMB7	Q99436	277 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	ANKZF1	Q9H8Y5	726 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	TUFT1	Q9NNX1	390 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	OGFR	Q9NZT2	677 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	TRAF3IP3	Q9Y228	551 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	SAMM50	Q9Y512	469 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	ZNF541	Q9H0D2	1346 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	WDR46	O15213	610 aa	Known RBP	13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	VAV2	P52735	878 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	RAPGEF1	Q13905	1077 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	EDRF1	Q3B7T1	1238 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	FAM133A	Q8N9E0	248 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	TEKT3	Q9BXF9	490 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	MYO1A	Q9UBC5	1043 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	KIF5A	Q12840	1032 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	TRAF1	Q13077	416 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	NSMF	Q6X4W1	530 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	GPR161	Q8N6U8	529 aa	Known RBP	13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	ATG4C	Q96DT6	458 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	SLC38A10	Q9HBR0	1119 aa		13.36	□□□□□ -0.27
STRADA-222	ENST00000583085	SLC26A4	O43511	780 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	PNMA6A	P0CW24	399 aa	Predicted RBP	13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	MARS	P56192	900 aa	Known RBP	13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	CDK17	Q00537	523 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	GJB7	Q6PEY0	223 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	NLGN2	Q8NFZ4	835 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	RABGGTA	Q92696	567 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	FIZ1	Q96SL8	496 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	MMS19	Q96T76	1030 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	KIAA1683	Q9H0B3	1180 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	AJAP1	Q9UKB5	411 aa	Predicted RBP	13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	TISP43	B9A030	160 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	DHX15	O43143	795 aa	Known RBP	13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	ATP9A	O75110	1047 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	TNFAIP1	Q13829	316 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	ANGEL2	Q5VTE6	544 aa	Known RBP	13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	FOXR2	Q6PJQ5	311 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	B3GNT9	Q6UX72	402 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	TRAPPC11	Q7Z392	1133 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	HINFP	Q9BQA5	517 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	CEP72	Q9P209	647 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	BUB1	O43683	1085 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	SASH3	O75995	380 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	GNA14	O95837	355 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	TKFC	Q3LXA3	575 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	TMCO3	Q6UWJ1	677 aa		13.35	□□□□□ -0.27
STRADA-222	ENST00000583085	EHMT1	Q9H9B1	1298 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms