RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 LRFN3Q9BTN0 628 aa16.49■□□□□ 0.23
ITGB4-208ENST00000582629 CD320Q9NPF0 282 aa16.49■□□□□ 0.23
ITGB4-208ENST00000582629 KIAA1671Q9BY89 1806 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 SMIM35A0A1B0GVV1 85 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 POTEB3A0JP26 581 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 PI4K2BG5E9Z4 385 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 H3BQ06 376 aaPredicted RBP16.48■□□□□ 0.23
ITGB4-208ENST00000582629 NCK2O43639 380 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 HMGB1P09429 215 aaKnown RBP16.48■□□□□ 0.23
ITGB4-208ENST00000582629 ZNF76P36508 570 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 TMEM62Q0P6H9 643 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 PAK2Q13177 524 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 POTEBQ6S5H4 581 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 MTHFD1LQ6UB35 978 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 GJD3Q8N144 294 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 NME8Q8N427 588 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 TRAPPC12Q8WVT3 735 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 KHSRPQ92945 711 aaKnown RBP eCLIP16.48■□□□□ 0.23
ITGB4-208ENST00000582629 PLVAPQ9BX97 442 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 CELF4Q9BZC1 486 aaKnown RBP16.48■□□□□ 0.23
ITGB4-208ENST00000582629 FAM217BQ9NTX9 383 aaPredicted RBP16.48■□□□□ 0.23
ITGB4-208ENST00000582629 TMEM260Q9NX78 707 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 FAM50BQ9Y247 325 aa16.48■□□□□ 0.23
ITGB4-208ENST00000582629 IGSF9BQ9UPX0 1349 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 KDM3AQ9Y4C1 1321 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 IGKV6D-21A0A0A0MT36 114 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 DDX39AO00148 427 aaKnown RBP16.47■□□□□ 0.23
ITGB4-208ENST00000582629 GRM6O15303 877 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 GPR37L1O60883 481 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 CDC45O75419 566 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 CDC27P30260 824 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 SSTR3P32745 418 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-208ENST00000582629 PFKFB3Q16875 520 aaPredicted RBP16.47■□□□□ 0.23
ITGB4-208ENST00000582629 FAM160B1Q5W0V3 765 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 EP400NLQ6ZTU2 488 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 SKAP1Q86WV1 359 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 NPAS4Q8IUM7 802 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 CMTR2Q8IYT2 770 aaKnown RBP16.47■□□□□ 0.23
ITGB4-208ENST00000582629 CLDND1Q9NY35 253 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 PADI3Q9ULW8 664 aa16.47■□□□□ 0.23
ITGB4-208ENST00000582629 MYH9P35579 1960 aaKnown RBP16.47■□□□□ 0.23
ITGB4-208ENST00000582629 CCDC196A0A1B0GTZ2 297 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 BACH1O14867 736 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 HBP1O60381 514 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 CCNE2O96020 404 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 MMP1P03956 469 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 STAG3L1P0CL83 205 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 PLA2G5P39877 138 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 METAP2P50579 478 aaKnown RBP eCLIP16.46■□□□□ 0.23
ITGB4-208ENST00000582629 FGD1P98174 961 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 KRT76Q01546 638 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 JAKMIP3Q5VZ66 844 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 MIS18BP1Q6P0N0 1132 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 ABHD15Q6UXT9 468 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 FAM43BQ6ZT52 329 aaPredicted RBP16.46■□□□□ 0.23
ITGB4-208ENST00000582629 RTN4RL1Q86UN2 441 aaPredicted RBP16.46■□□□□ 0.23
ITGB4-208ENST00000582629 PLA2G4DQ86XP0 818 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 ATP8B4Q8TF62 1192 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 FAM122AQ96E09 287 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 NAP1L2Q9ULW6 460 aaPredicted RBP16.46■□□□□ 0.23
ITGB4-208ENST00000582629 HCN4Q9Y3Q4 1203 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 COL1A2P08123 1366 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 EVPLQ92817 2033 aa16.46■□□□□ 0.23
ITGB4-208ENST00000582629 ESYT2A0FGR8 921 aa16.45■□□□□ 0.22
ITGB4-208ENST00000582629 FAM86B1E9PN63 330 aa16.45■□□□□ 0.22
ITGB4-208ENST00000582629 CYP3A4P08684 503 aa16.45■□□□□ 0.22
ITGB4-208ENST00000582629 FAM86B2P0C5J1 330 aa16.45■□□□□ 0.22
ITGB4-208ENST00000582629 SCG2P13521 617 aa16.45■□□□□ 0.22
ITGB4-208ENST00000582629 NAALADL2Q58DX5 795 aa16.45■□□□□ 0.22
ITGB4-208ENST00000582629 MCTP2Q6DN12 878 aa16.45■□□□□ 0.22
ITGB4-208ENST00000582629 CRIPAKQ8N1N5 446 aa16.45■□□□□ 0.22
ITGB4-208ENST00000582629 CCDC12Q8WUD4 166 aaPredicted RBP16.45■□□□□ 0.22
ITGB4-208ENST00000582629 P2RX5Q93086 422 aa16.45■□□□□ 0.22
ITGB4-208ENST00000582629 C11orf16Q9NQ32 467 aa16.45■□□□□ 0.22
ITGB4-208ENST00000582629 ZNF302Q9NR11 478 aa16.45■□□□□ 0.22
ITGB4-208ENST00000582629 ARIH1Q9Y4X5 557 aaPredicted RBP16.45■□□□□ 0.22
ITGB4-208ENST00000582629 MRPL42Q9Y6G3 142 aaKnown RBP16.45■□□□□ 0.22
ITGB4-208ENST00000582629 KLRC1P26715 233 aa16.44■□□□□ 0.22
ITGB4-208ENST00000582629 ADD1P35611 737 aaKnown RBP16.44■□□□□ 0.22
ITGB4-208ENST00000582629 SETQ01105 290 aaPredicted RBP16.44■□□□□ 0.22
ITGB4-208ENST00000582629 CTC1Q2NKJ3 1217 aa16.44■□□□□ 0.22
ITGB4-208ENST00000582629 ZNF484Q5JVG2 852 aa16.44■□□□□ 0.22
ITGB4-208ENST00000582629 PDXDC2PQ6P474 469 aa16.44■□□□□ 0.22
ITGB4-208ENST00000582629 CCDC60Q8IWA6 550 aaPredicted RBP16.44■□□□□ 0.22
ITGB4-208ENST00000582629 CRYGNQ8WXF5 182 aa16.44■□□□□ 0.22
ITGB4-208ENST00000582629 ZMYND12Q9H0C1 365 aa16.44■□□□□ 0.22
ITGB4-208ENST00000582629 C6orf50Q9HD87 102 aa16.44■□□□□ 0.22
ITGB4-208ENST00000582629 PRKAG3Q9UGI9 489 aa16.44■□□□□ 0.22
ITGB4-208ENST00000582629 LRFN2Q9ULH4 789 aa16.44■□□□□ 0.22
ITGB4-208ENST00000582629 NID2Q14112 1375 aa16.43■□□□□ 0.22
ITGB4-208ENST00000582629 IGLV3-22A0A075B6J6 115 aa16.43■□□□□ 0.22
ITGB4-208ENST00000582629 FAM86C2PA6NEL3 165 aa16.43■□□□□ 0.22
ITGB4-208ENST00000582629 IPO5O00410 1097 aaKnown RBP16.43■□□□□ 0.22
ITGB4-208ENST00000582629 DHX15O43143 795 aaKnown RBP16.43■□□□□ 0.22
ITGB4-208ENST00000582629 ALADP13716 330 aa16.43■□□□□ 0.22
ITGB4-208ENST00000582629 LTBRP36941 435 aa16.43■□□□□ 0.22
ITGB4-208ENST00000582629 APOBRQ0VD83 1088 aa16.43■□□□□ 0.22
ITGB4-208ENST00000582629 HYAL1Q12794 435 aa16.43■□□□□ 0.22
ITGB4-208ENST00000582629 NFX1Q12986 1120 aaKnown RBP16.43■□□□□ 0.22
ITGB4-208ENST00000582629 TMEM266Q2M3C6 531 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms