RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	METAP2	P50579	478 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	KRT32	Q14532	448 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	CLUL1	Q15846	466 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	TMEM266	Q2M3C6	531 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	MTHFD1L	Q6UB35	978 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PLPPR4	Q7Z2D5	763 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	RTN4RL1	Q86UN2	441 aa	Predicted RBP	13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PLA2G4D	Q86XP0	818 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	LRFN3	Q9BTN0	628 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	RC3H2	Q9HBD1	1191 aa	Known RBP	13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PADI3	Q9ULW8	664 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PCDHA2	Q9Y5H9	948 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	MYO7A	Q13402	2215 aa		13.25	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	TTC3	P53804	2025 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	FAM86B1	E9PN63	330 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	DGKI	O75912	1065 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	FAM86B2	P0C5J1	330 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	KLRC1	P26715	233 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	GATM	P50440	423 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PAK2	Q13177	524 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	AP3B2	Q13367	1082 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	TSGA10IP	Q3SY00	556 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114		Q6ZUG5	572 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	FAM178B	Q8IXR5	827 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	NEK9	Q8TD19	979 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	BRF1	Q92994	677 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ZNF689	Q96CS4	500 aa	Predicted RBP	13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	JAKMIP1	Q96N16	626 aa	Known RBP	13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	CELF4	Q9BZC1	486 aa	Known RBP	13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	IGFLR1	Q9H665	355 aa		13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ALG13	Q9NP73	1137 aa	Known RBP	13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	MRPL42	Q9Y6G3	142 aa	Known RBP	13.24	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	IGSF9B	Q9UPX0	1349 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	GRXCR2	A6NFK2	248 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	C5orf67	F2Z3F1	127 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	hCG_1984214	I3L0E3	225 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ATG7	O95352	703 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	RB1	P06400	928 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	SCG2	P13521	617 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	KRT76	Q01546	638 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	HYAL1	Q12794	435 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	NFX1	Q12986	1120 aa	Known RBP	13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PFKFB3	Q16875	520 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	TMEM31	Q5JXX7	168 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	SWSAP1	Q6NVH7	229 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PDXDC2P	Q6P474	469 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ABHD15	Q6UXT9	468 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	CKAP2L	Q8IYA6	745 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	GJD3	Q8N144	294 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ZNF713	Q8N859	430 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	RASGRP4	Q8TDF6	673 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	TNPO1	Q92973	898 aa	Known RBP	13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	CLP1	Q92989	425 aa	Known RBP	13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PHKB	Q93100	1093 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PABPC5	Q96DU9	382 aa	Known RBP	13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	TMX1	Q9H3N1	280 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	CDHR5	Q9HBB8	845 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	C11orf16	Q9NQ32	467 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ZNF302	Q9NR11	478 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	RWDD3	Q9Y3V2	267 aa		13.23	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	IGLV3-22	A0A075B6J6	115 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	IGKV6D-21	A0A0A0MT36	114 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	SMIM35	A0A1B0GVV1	85 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	IPO5	O00410	1097 aa	Known RBP	13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	MGEA5	O60502	916 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	HMGB1	P09429	215 aa	Known RBP	13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	DLX2	Q07687	328 aa	Predicted RBP	13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	FAM160B1	Q5W0V3	765 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	NIPA1	Q7RTP0	329 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	NPAS4	Q8IUM7	802 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ATP8B4	Q8TF62	1192 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ZNF577	Q9BSK1	485 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	FTHL17	Q9BXU8	183 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	GLT8D2	Q9H1C3	349 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	LRFN2	Q9ULH4	789 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	SNX14	Q9Y5W7	946 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	KIAA1671	Q9BY89	1806 aa		13.22	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PI4K2B	G5E9Z4	385 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	LINC01565	O15544	149 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	DHX15	O43143	795 aa	Known RBP	13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	HBP1	O60381	514 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	RPLP2	P05387	115 aa	Known RBP	13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	ATP4A	P20648	1035 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	DNAJB1	P25685	340 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	LTBR	P36941	435 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	SLC26A2	P50443	739 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PKN1	Q16512	942 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	KIZ	Q2M2Z5	673 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PRR16	Q569H4	304 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	MIS18BP1	Q6P0N0	1132 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	BLOC1S2	Q6QNY1	142 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	KIAA0319L	Q8IZA0	1049 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	TMEM40	Q8WWA1	233 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	TCEAL9	Q9UHQ7	104 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	PLAGL2	Q9UPG8	496 aa		13.21	□□□□□ -0.29
CDK5RAP3-223	ENST00000582114	NOC2L	Q9Y3T9	749 aa	Known RBP	13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms