RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 BTBD8Q5XKL5 378 aa5.76□□□□□ -1.49
SMCHD1-206ENST00000581631 TRIM68Q6AZZ1 485 aa5.76□□□□□ -1.49
SMCHD1-206ENST00000581631 CXXC5Q7LFL8 322 aaKnown RBP5.76□□□□□ -1.49
SMCHD1-206ENST00000581631 VPS37DQ86XT2 251 aa5.76□□□□□ -1.49
SMCHD1-206ENST00000581631 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMCHD1-206ENST00000581631 KIAA1683Q9H0B3 1180 aa5.76□□□□□ -1.49
SMCHD1-206ENST00000581631 BTBD7Q9P203 1132 aa5.76□□□□□ -1.49
SMCHD1-206ENST00000581631 MAN2B1O00754 1011 aa5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 MPIG6BO95866 241 aa5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 AMY2AP04746 511 aa5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 AMY2BP19961 511 aa5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 AOAHP28039 575 aa5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 RPS19P39019 145 aaKnown RBP5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 YOD1Q5VVQ6 348 aaPredicted RBP5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 NSMFQ6X4W1 530 aa5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 LARP4BQ92615 738 aaKnown RBP5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 WNK4Q96J92 1243 aa5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 TINF2Q9BSI4 451 aa5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 ST7Q9NRC1 585 aa5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 CEP72Q9P209 647 aa5.75□□□□□ -1.49
SMCHD1-206ENST00000581631 A0A087X1B8 175 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 KLF4O43474 513 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 PTGS1P23219 599 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 NANOS3P60323 173 aaKnown RBP5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 HGFACQ04756 655 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 TUBA3CQ13748 450 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 GPR19Q15760 415 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 WDR72Q3MJ13 1102 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 KANK2Q63ZY3 851 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 TUBA3EQ6PEY2 450 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 Q6ZPA2 131 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 GPR135Q8IZ08 494 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 NEU4Q8WWR8 484 aaPredicted RBP5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 PLEKHG4BQ96PX9 1271 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 TLR9Q9NR96 1032 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 HECAQ9UBI9 543 aaPredicted RBP5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 FBXO10Q9UK96 956 aa5.74□□□□□ -1.49
SMCHD1-206ENST00000581631 C4BPAP04003 597 aaKnown RBP5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 HMGCRP04035 888 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 MC4RP32245 332 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 MSX2P35548 267 aaPredicted RBP5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 FIGNQ5HY92 759 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 TMEM200BQ69YZ2 307 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 USP30Q70CQ3 517 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 ZNF627Q7L945 461 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 NLGN4XQ8N0W4 816 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 ST13P5Q8NFI4 369 aaPredicted RBP5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 AMNQ9BXJ7 453 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 MMRN2Q9H8L6 949 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 INCENPQ9NQS7 918 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 GALNT8Q9NY28 637 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 PLA2G3Q9NZ20 509 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 TRAF6Q9Y4K3 522 aa5.73□□□□□ -1.49
SMCHD1-206ENST00000581631 TRAV20A0A0B4J274 112 aa5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 PMS2P1A4D2B8 440 aa5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 IQCA1LA6NCM1 817 aa5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 KRT4P19013 534 aa5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 KCNQ1P51787 676 aa5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 IFRD2Q12894 506 aaPredicted RBP5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 PCOLCEQ15113 449 aa5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 ARHGAP36Q6ZRI8 547 aa5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 ZNF483Q8TF39 744 aaPredicted RBP5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 AGAP2Q99490 1192 aa5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 ALG1Q9BT22 464 aa5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 C12orf65Q9H3J6 166 aaKnown RBP5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 RIC8BQ9NVN3 520 aa5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 AURKAIP1Q9NWT8 199 aaPredicted RBP5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 ARHGAP28Q9P2N2 729 aa5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 PUF60Q9UHX1 559 aaKnown RBP5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 CBLCQ9ULV8 474 aa5.72□□□□□ -1.49
SMCHD1-206ENST00000581631 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.5
SMCHD1-206ENST00000581631 C6orf222P0C671 652 aaPredicted RBP5.71□□□□□ -1.5
SMCHD1-206ENST00000581631 ERCC5P28715 1186 aaPredicted RBP5.71□□□□□ -1.5
SMCHD1-206ENST00000581631 GJA4P35212 333 aa5.71□□□□□ -1.5
SMCHD1-206ENST00000581631 ADCY8P40145 1251 aa5.71□□□□□ -1.5
SMCHD1-206ENST00000581631 HERVK_113P62684 666 aa5.71□□□□□ -1.5
SMCHD1-206ENST00000581631 SPTY2D1Q68D10 685 aaPredicted RBP5.71□□□□□ -1.5
SMCHD1-206ENST00000581631 PCDH19Q8TAB3 1148 aa5.71□□□□□ -1.5
SMCHD1-206ENST00000581631 BTBD2Q9BX70 525 aa5.71□□□□□ -1.5
SMCHD1-206ENST00000581631 NELFAQ9H3P2 528 aa5.71□□□□□ -1.5
SMCHD1-206ENST00000581631 AGO3Q9H9G7 860 aaKnown RBP5.71□□□□□ -1.5
SMCHD1-206ENST00000581631 ATP23Q9Y6H3 246 aa5.71□□□□□ -1.5
SMCHD1-206ENST00000581631 ZNF561-AS1K7EIQ3 104 aa5.7□□□□□ -1.5
SMCHD1-206ENST00000581631 ARVCFO00192 962 aa5.7□□□□□ -1.5
SMCHD1-206ENST00000581631 PDE6AP16499 860 aa5.7□□□□□ -1.5
SMCHD1-206ENST00000581631 HIBADHP31937 336 aaKnown RBP5.7□□□□□ -1.5
SMCHD1-206ENST00000581631 COL10A1Q03692 680 aa5.7□□□□□ -1.5
SMCHD1-206ENST00000581631 PAK1Q13153 545 aa5.7□□□□□ -1.5
SMCHD1-206ENST00000581631 SEC23AQ15436 765 aa5.7□□□□□ -1.5
SMCHD1-206ENST00000581631 ANKS3Q6ZW76 656 aa5.7□□□□□ -1.5
SMCHD1-206ENST00000581631 PTRH1Q86Y79 214 aaKnown RBP5.7□□□□□ -1.5
SMCHD1-206ENST00000581631 TMPRSS6Q8IU80 811 aa5.7□□□□□ -1.5
SMCHD1-206ENST00000581631 OR10A2Q9H208 303 aa5.7□□□□□ -1.5
SMCHD1-206ENST00000581631 CLASP2O75122 1294 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 ADH4P08319 380 aa5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 DNAJA1P31689 397 aaKnown RBP5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 MRE11P49959 708 aa5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 CD83Q01151 205 aa5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 LRSAM1Q6UWE0 723 aa5.69□□□□□ -1.5
SMCHD1-206ENST00000581631 DPH6Q7L8W6 267 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms