RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 MXD3Q9BW11 206 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 PRDM14Q9GZV8 571 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 C19orf73Q9NVV2 129 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 SPEF2Q9C093 1822 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 PRUNE2Q8WUY3 3088 aa8.31□□□□□ -1.08
PPP4R1-216ENST00000580283 WNT10BO00744 389 aa8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 SIGLEC6O43699 453 aa8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 PRAMEF1O95521 474 aa8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 PMS1P54277 932 aaKnown RBP8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 RPS8P62241 208 aaKnown RBP8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 AUHQ13825 339 aaKnown RBP8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 UNC5AQ6ZN44 842 aa8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 OR6P1Q8NGX9 317 aa8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 TCTN2Q96GX1 697 aa8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 CLMNQ96JQ2 1002 aa8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 CHST7Q9NS84 486 aa8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 SLC12A7Q9Y666 1083 aa8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 ALPK3Q96L96 1907 aa8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 OTOFQ9HC10 1997 aa8.3□□□□□ -1.08
PPP4R1-216ENST00000580283 U2AF1L5P0DN76 240 aaPredicted RBP8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 EIF2S2P20042 333 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 PCBP3P57721 371 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 U2AF1Q01081 240 aaKnown RBP eCLIP8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 AIMP1Q12904 312 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 CRHR2Q13324 411 aa8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 BBS9Q3SYG4 887 aa8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 TMEM67Q5HYA8 995 aa8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 TDRD10Q5VZ19 366 aaKnown RBP8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 RNF111Q6ZNA4 994 aa8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 EYA3Q99504 573 aa8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 KRTAP4-8Q9BYQ9 185 aa8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 CAPN10Q9HC96 672 aa8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 GFOD1Q9NXC2 390 aa8.29□□□□□ -1.08
PPP4R1-216ENST00000580283 SSC5DA1L4H1 1573 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 RPL10P27635 214 aaKnown RBP8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 GIPRP48546 466 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 INHBEP58166 350 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 TEKQ02763 1124 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 DUSP4Q13115 394 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 GNL2Q13823 731 aaKnown RBP8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 ZYXQ15942 572 aaKnown RBP8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 DACT2Q5SW24 774 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 FYB2Q5VWT5 728 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 VPS37DQ86XT2 251 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 C7orf61Q8IZ16 206 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 OXR1Q8N573 874 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 ABHD4Q8TB40 342 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 PNISRQ8TF01 805 aaKnown RBP8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 MYLIPQ8WY64 445 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 ZBED3Q96IU2 234 aaPredicted RBP8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 PLEKHF1Q96S99 279 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 ISCA1Q9BUE6 129 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 FOXP3Q9BZS1 431 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 TCFL5Q9UL49 500 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 STRIP2Q9ULQ0 834 aa8.28□□□□□ -1.08
PPP4R1-216ENST00000580283 DNAH12Q6ZR08 3092 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 MANSC4A6NHS7 340 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 C9IYK1 514 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 MEIS1O00470 390 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 UFL1O94874 794 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 TP53P04637 393 aaPredicted RBP8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 GLI1P08151 1106 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 ZGLP1P0C6A0 271 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 SP3Q02447 781 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 PPP2R5EQ16537 467 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 PDZD8Q8NEN9 1154 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 SHISA4Q96DD7 197 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 ERO1AQ96HE7 468 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 WNK4Q96J92 1243 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 DSCC1Q9BVC3 393 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 FAM86C1Q9NVL1 165 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 FAM53CQ9NYF3 392 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 ZMYM5Q9UJ78 669 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 PTCH2Q9Y6C5 1203 aa8.27□□□□□ -1.09
PPP4R1-216ENST00000580283 SASH1O94885 1247 aa8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 HPXP02790 462 aa8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 SYPP08247 313 aa8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 ERVFC1P60507 584 aa8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 KRT24Q2M2I5 525 aa8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 HSP90AB3PQ58FF7 597 aa8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 NOL9Q5SY16 702 aaKnown RBP8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 MPZL3Q6UWV2 235 aa8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 ARMC9Q7Z3E5 817 aa8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 UBE2Q1Q7Z7E8 422 aa8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 PRR13Q9NZ81 148 aa8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 MINPP1Q9UNW1 487 aa8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 PCDHAC2Q9Y5I4 1007 aa8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.26□□□□□ -1.09
PPP4R1-216ENST00000580283 MYH3P11055 1940 aa8.25□□□□□ -1.09
PPP4R1-216ENST00000580283 FITM1A5D6W6 292 aa8.25□□□□□ -1.09
PPP4R1-216ENST00000580283 E9PSI1 815 aa8.25□□□□□ -1.09
PPP4R1-216ENST00000580283 IRS4O14654 1257 aaPredicted RBP8.25□□□□□ -1.09
PPP4R1-216ENST00000580283 USP2O75604 605 aaPredicted RBP8.25□□□□□ -1.09
PPP4R1-216ENST00000580283 ZBTB48P10074 688 aaPredicted RBP8.25□□□□□ -1.09
PPP4R1-216ENST00000580283 PPP2R1AP30153 589 aa8.25□□□□□ -1.09
PPP4R1-216ENST00000580283 NFE2L2Q16236 605 aa8.25□□□□□ -1.09
PPP4R1-216ENST00000580283 DCAF15Q66K64 600 aa8.25□□□□□ -1.09
PPP4R1-216ENST00000580283 PPFIBP1Q86W92 1011 aa8.25□□□□□ -1.09
PPP4R1-216ENST00000580283 SPPL2CQ8IUH8 684 aa8.25□□□□□ -1.09
PPP4R1-216ENST00000580283 C19orf47Q8N9M1 422 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms