RNA–Protein interactions for RNA: ENST00000577827.5

PTPRM-205, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 4,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-205ENST00000577827 SP4Q02446 784 aa11.19□□□□□ -0.62
PTPRM-205ENST00000577827 FAM102BQ5T8I3 360 aa11.19□□□□□ -0.62
PTPRM-205ENST00000577827 DDX17Q92841 729 aaKnown RBP11.19□□□□□ -0.62
PTPRM-205ENST00000577827 DCP1AQ9NPI6 582 aaPredicted RBP11.19□□□□□ -0.62
PTPRM-205ENST00000577827 SERPINB13Q9UIV8 391 aa11.19□□□□□ -0.62
PTPRM-205ENST00000577827 DNAJC12Q9UKB3 198 aa11.19□□□□□ -0.62
PTPRM-205ENST00000577827 PRPF6O94906 941 aaKnown RBP11.18□□□□□ -0.62
PTPRM-205ENST00000577827 MYCLP12524 364 aaPredicted RBP11.18□□□□□ -0.62
PTPRM-205ENST00000577827 ELF1P32519 619 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 LIG4P49917 911 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 GPC5P78333 572 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 FIGNQ5HY92 759 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 USP49Q70CQ1 688 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 SYN2Q92777 582 aaPredicted RBP11.18□□□□□ -0.62
PTPRM-205ENST00000577827 MAP3K14Q99558 947 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 TMEM60Q9H2L4 133 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 KANSL2Q9H9L4 492 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 SUGCTQ9HAC7 445 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 AGPAT5Q9NUQ2 364 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.18□□□□□ -0.62
PTPRM-205ENST00000577827 USP17L3A6NCW0 530 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 USP17L4A6NCW7 530 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 RNF8O76064 485 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 P4HA1P13674 534 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 CDK17Q00537 523 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 MYO1EQ12965 1108 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 XKR9Q5GH70 373 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 KDM7AQ6ZMT4 941 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 USP17L1Q7RTZ2 530 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 MCF2L2Q86YR7 1114 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 TTC25Q96NG3 672 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 ZIM3Q96PE6 472 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 TMEM47Q9BQJ4 181 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 TPX2Q9ULW0 747 aaKnown RBP11.18□□□□□ -0.62
PTPRM-205ENST00000577827 ACSL3O95573 720 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 CDK8P49336 464 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 KNOP1Q1ED39 458 aaKnown RBP11.18□□□□□ -0.62
PTPRM-205ENST00000577827 CASC4Q6P4E1 433 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 CAPN12Q6ZSI9 719 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 SEPT14Q6ZU15 432 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 FRMD5Q7Z6J6 570 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 RNF168Q8IYW5 571 aaPredicted RBP11.18□□□□□ -0.62
PTPRM-205ENST00000577827 SH2D3CQ8N5H7 860 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 GDAP1Q8TB36 358 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 OVOS2A0A0G2JMS6 1433 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 ABCB11O95342 1321 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 SLC26A4O43511 780 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 ZBED4O75132 1171 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 NR3C1P04150 777 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 HNRNPH1P31943 449 aaKnown RBP11.18□□□□□ -0.62
PTPRM-205ENST00000577827 ARHGAP4P98171 946 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 SNX1Q13596 522 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 CLEC4GQ6UXB4 293 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 CENPUQ71F23 418 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 ARMC2Q8NEN0 867 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 DEPTORQ8TB45 409 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 DYNLL2Q96FJ2 89 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 AZI2Q9H6S1 392 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 TRIM10Q9UDY6 481 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 PLAGL2Q9UPG8 496 aa11.18□□□□□ -0.62
PTPRM-205ENST00000577827 H3BQF6 201 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 MT-ND3P03897 115 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 DLATP10515 647 aaKnown RBP11.17□□□□□ -0.62
PTPRM-205ENST00000577827 CDKAL1Q5VV42 579 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 CDKL2Q92772 493 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 SLAIN2Q9P270 581 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 NBPF26B4DH59 902 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 ESRRAP11474 423 aaPredicted RBP11.17□□□□□ -0.62
PTPRM-205ENST00000577827 ERVK-24P63145 666 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 PTGISQ16647 500 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 SUSD4Q5VX71 490 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 TBC1D9BQ66K14 1250 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 MAP7D3Q8IWC1 876 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 NBPF15Q8N660 670 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 CEP120Q8N960 986 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 POMGNT1Q8WZA1 660 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 ANO3Q9BYT9 981 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 ISCUQ9H1K1 167 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 ANKZF1Q9H8Y5 726 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 RBM12Q9NTZ6 932 aaKnown RBP11.17□□□□□ -0.62
PTPRM-205ENST00000577827 TBK1Q9UHD2 729 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 POTEMA6NI47 508 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 DAPK3O43293 454 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 CHGBP05060 677 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 CSF1RP07333 972 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 YWHAGP61981 247 aaKnown RBP eCLIP11.17□□□□□ -0.62
PTPRM-205ENST00000577827 TBX2Q13207 712 aaPredicted RBP11.17□□□□□ -0.62
PTPRM-205ENST00000577827 PIGBQ92521 554 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 SUDS3Q9H7L9 328 aaPredicted RBP11.17□□□□□ -0.62
PTPRM-205ENST00000577827 SEL1LQ9UBV2 794 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 LCMT1Q9UIC8 334 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 SSX2IPQ9Y2D8 614 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 VWDEQ8N2E2 1590 aa11.17□□□□□ -0.62
PTPRM-205ENST00000577827 PP2D1A8MPX8 630 aa11.16□□□□□ -0.62
PTPRM-205ENST00000577827 SGK1O00141 431 aa11.16□□□□□ -0.62
PTPRM-205ENST00000577827 HNRNPCL1O60812 293 aaKnown RBP11.16□□□□□ -0.62
PTPRM-205ENST00000577827 FCER1AP12319 257 aa11.16□□□□□ -0.62
PTPRM-205ENST00000577827 TCP10Q12799 353 aa11.16□□□□□ -0.62
PTPRM-205ENST00000577827 SRBD1Q8N5C6 995 aaKnown RBP11.16□□□□□ -0.62
PTPRM-205ENST00000577827 CYFIP2Q96F07 1278 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms