RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 PBX4Q9BYU1 374 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 RC3H2Q9HBD1 1191 aaKnown RBP9.83□□□□□ -0.84
SMG6-216ENST00000575176 TBC1D22BQ9NU19 505 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 TUBE1Q9UJT0 475 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 COL1A2P08123 1366 aa9.83□□□□□ -0.84
SMG6-216ENST00000575176 TMEM150BA6NC51 233 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 TOB1P50616 345 aaPredicted RBP9.82□□□□□ -0.84
SMG6-216ENST00000575176 STAT5BP51692 787 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 WDR5P61964 334 aaKnown RBP9.82□□□□□ -0.84
SMG6-216ENST00000575176 DEFB103AP81534 67 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 GUCY1B3Q02153 619 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 PRKCEQ02156 737 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 CUL4AQ13619 759 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 LETM2Q2VYF4 491 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 PLEKHG4Q58EX7 1191 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 LRCH2Q5VUJ6 765 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 OTOP2Q7RTS6 562 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 DEFB128Q7Z7B8 93 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 CRIPAKQ8N1N5 446 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 WASF1Q92558 559 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 ZSCAN31Q96LW9 406 aaPredicted RBP9.82□□□□□ -0.84
SMG6-216ENST00000575176 MTMR9Q96QG7 549 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 TMEM60Q9H2L4 133 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 MTMR10Q9NXD2 777 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 DDX25Q9UHL0 483 aaKnown RBP9.82□□□□□ -0.84
SMG6-216ENST00000575176 KDM3AQ9Y4C1 1321 aa9.82□□□□□ -0.84
SMG6-216ENST00000575176 CCDC194A0A1B0GVG4 234 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.81□□□□□ -0.84
SMG6-216ENST00000575176 POTEB3A0JP26 581 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 WDR64B1ANS9 1081 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 TBX3O15119 743 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 GAS7O60861 476 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 CTSHP09668 335 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 LINC00271P0C7V0 271 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 GCFC2P16383 781 aaKnown RBP9.81□□□□□ -0.84
SMG6-216ENST00000575176 DNAJB2P25686 324 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 U2AF2P26368 475 aaKnown RBP eCLIP9.81□□□□□ -0.842e-8■■■□□ 17.8
SMG6-216ENST00000575176 ZNF76P36508 570 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 THPOP40225 353 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 SLC26A2P50443 739 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 LPIN1Q14693 890 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 SWSAP1Q6NVH7 229 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 POTEBQ6S5H4 581 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 MTHFD1LQ6UB35 978 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 TMCO2Q7Z6W1 182 aaPredicted RBP9.81□□□□□ -0.84
SMG6-216ENST00000575176 C4orf32Q8N8J7 132 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 RDM1Q8NG50 284 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 TMEM40Q8WWA1 233 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 GLG1Q92896 1179 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 AGO3Q9H9G7 860 aaKnown RBP9.81□□□□□ -0.84
SMG6-216ENST00000575176 ZNF302Q9NR11 478 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 DISC1Q9NRI5 854 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 GABBR1Q9UBS5 961 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 PCDHA2Q9Y5H9 948 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 PCDHA10Q9Y5I2 948 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 MYO9BQ13459 2157 aa9.81□□□□□ -0.84
SMG6-216ENST00000575176 IGKV6-21A0A0C4DH24 114 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 RSPH10B2B2RC85 870 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 CHMP2AO43633 222 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 BAIAP3O94812 1187 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 FGBP02675 491 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 OATP04181 439 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 RSPH10BP0C881 870 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 MYOGP15173 224 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 HMGN5P82970 282 aaKnown RBP9.8□□□□□ -0.84
SMG6-216ENST00000575176 DRP2Q13474 957 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 NBR1Q14596 966 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 FBXO47Q5MNV8 452 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 MIS18BP1Q6P0N0 1132 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 TAF2Q6P1X5 1199 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 PDXDC2PQ6P474 469 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 CNKSR3Q6P9H4 555 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 ANO5Q75V66 913 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 KIAA0319LQ8IZA0 1049 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 CCDC155Q8N6L0 562 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 DNAJB3Q8WWF6 145 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 BBXQ8WY36 941 aaPredicted RBP9.8□□□□□ -0.84
SMG6-216ENST00000575176 TEKT3Q9BXF9 490 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 FOXP1Q9H334 677 aaPredicted RBP9.8□□□□□ -0.84
SMG6-216ENST00000575176 NOD1Q9Y239 953 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 BRWD1Q9NSI6 2320 aa9.8□□□□□ -0.84
SMG6-216ENST00000575176 C5orf42Q9H799 3197 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 TMEM265A0A087WTH1 108 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 SMIM35A0A1B0GVV1 85 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 LCHNA4D1U4 455 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 HBP1O60381 514 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 CCNT1O60563 726 aaKnown RBP9.79□□□□□ -0.84
SMG6-216ENST00000575176 GPR32O75388 356 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 PSAPP07602 524 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 XBP1P17861 261 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 SFNP31947 248 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 JAK3P52333 1124 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 RABGGTBP53611 331 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 IGBP1P78318 339 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 MRPS6P82932 125 aaKnown RBP9.79□□□□□ -0.84
SMG6-216ENST00000575176 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMG6-216ENST00000575176 NOSTRINQ8IVI9 506 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 DEFB123Q8N688 67 aa9.79□□□□□ -0.84
SMG6-216ENST00000575176 ZNF579Q8NAF0 562 aaKnown RBP9.79□□□□□ -0.84
SMG6-216ENST00000575176 IL27Q8NEV9 243 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms