RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 TRERF1Q96PN7 1200 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 CRACR2AQ9BSW2 395 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 EDEM3Q9BZQ6 932 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 ARMCX3Q9UH62 379 aaPredicted RBP15.47■□□□□ 0.07
VPS33B-208ENST00000574755 CDC23Q9UJX2 597 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 ASTN1O14525 1302 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 VWA5AO00534 786 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 PTPRAP18433 802 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 MRPS9P82933 396 aaKnown RBP15.47■□□□□ 0.07
VPS33B-208ENST00000574755 KCNA1Q09470 495 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 KCNH2Q12809 1159 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 FRMD5Q7Z6J6 570 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 ATG4CQ96DT6 458 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 TAAR1Q96RJ0 339 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 LSM14BQ9BX40 385 aaKnown RBP15.47■□□□□ 0.07
VPS33B-208ENST00000574755 NLRC4Q9NPP4 1024 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 KCND2Q9NZV8 630 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 CEP72Q9P209 647 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 PNMA2Q9UL42 364 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 SAMM50Q9Y512 469 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 UBIAD1Q9Y5Z9 338 aa15.47■□□□□ 0.07
VPS33B-208ENST00000574755 EIF3DO15371 548 aaKnown RBP eCLIP15.46■□□□□ 0.07
VPS33B-208ENST00000574755 NR3C1P04150 777 aa15.46■□□□□ 0.07
VPS33B-208ENST00000574755 FDX1P10109 184 aa15.46■□□□□ 0.07
VPS33B-208ENST00000574755 RPL13P26373 211 aaKnown RBP15.46■□□□□ 0.07
VPS33B-208ENST00000574755 NMT1P30419 496 aaKnown RBP15.46■□□□□ 0.07
VPS33B-208ENST00000574755 PDXDC1Q6P996 788 aa15.46■□□□□ 0.07
VPS33B-208ENST00000574755 NSMFQ6X4W1 530 aa15.46■□□□□ 0.07
VPS33B-208ENST00000574755 RNF207Q6ZRF8 634 aa15.46■□□□□ 0.07
VPS33B-208ENST00000574755 ZNF662Q6ZS27 426 aa15.46■□□□□ 0.07
VPS33B-208ENST00000574755 GPIHBP1Q8IV16 184 aa15.46■□□□□ 0.07
VPS33B-208ENST00000574755 SAMD3Q8N6K7 520 aa15.46■□□□□ 0.07
VPS33B-208ENST00000574755 WNK4Q96J92 1243 aa15.46■□□□□ 0.07
VPS33B-208ENST00000574755 AGO4Q9HCK5 861 aaKnown RBP15.46■□□□□ 0.07
VPS33B-208ENST00000574755 JADE2Q9NQC1 790 aa15.46■□□□□ 0.07
VPS33B-208ENST00000574755 ZNF112Q9UJU3 913 aa15.46■□□□□ 0.07
VPS33B-208ENST00000574755 COL11A1P12107 1806 aaPredicted RBP15.46■□□□□ 0.07
VPS33B-208ENST00000574755 ARHGEF35A5YM69 484 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 KIF11P52732 1056 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 ITGB3BPQ13352 177 aaPredicted RBP15.46■□□□□ 0.06
VPS33B-208ENST00000574755 TUBB2AQ13885 445 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 PGM5Q15124 567 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 TEX35Q5T0J7 233 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 ARHGAP27Q6ZUM4 889 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 FAM178BQ8IXR5 827 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 EHBP1Q8NDI1 1231 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 TRPM4Q8TD43 1214 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 RMDN3Q96TC7 470 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 TUBB2BQ9BVA1 445 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 LACRTQ9GZZ8 138 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 SEL1LQ9UBV2 794 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 ODF2LQ9ULJ1 636 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 ZHX2Q9Y6X8 837 aa15.46■□□□□ 0.06
VPS33B-208ENST00000574755 RCCD1A6NED2 376 aa15.45■□□□□ 0.06
VPS33B-208ENST00000574755 CLIC2O15247 247 aa15.45■□□□□ 0.06
VPS33B-208ENST00000574755 DHX15O43143 795 aaKnown RBP15.45■□□□□ 0.06
VPS33B-208ENST00000574755 AKR1B10O60218 316 aa15.45■□□□□ 0.06
VPS33B-208ENST00000574755 AKAP3O75969 853 aa15.45■□□□□ 0.06
VPS33B-208ENST00000574755 NOL4O94818 638 aa15.45■□□□□ 0.06
VPS33B-208ENST00000574755 P4HBP07237 508 aaKnown RBP15.45■□□□□ 0.06
VPS33B-208ENST00000574755 MYCLP12524 364 aaPredicted RBP15.45■□□□□ 0.06
VPS33B-208ENST00000574755 XRCC5P13010 732 aaKnown RBP15.45■□□□□ 0.06
VPS33B-208ENST00000574755 EIF4A3P38919 411 aaKnown RBP15.45■□□□□ 0.06
VPS33B-208ENST00000574755 HMGCS2P54868 508 aa15.45■□□□□ 0.06
VPS33B-208ENST00000574755 POLR2FP61218 127 aaKnown RBP15.45■□□□□ 0.06
VPS33B-208ENST00000574755 KIF5AQ12840 1032 aa15.45■□□□□ 0.06
VPS33B-208ENST00000574755 ZC2HC1CQ53FD0 456 aaPredicted RBP15.45■□□□□ 0.06
VPS33B-208ENST00000574755 NUCKS1Q9H1E3 243 aaKnown RBP15.45■□□□□ 0.06
VPS33B-208ENST00000574755 GGA3Q9NZ52 723 aa15.45■□□□□ 0.06
VPS33B-208ENST00000574755 ZNF263O14978 683 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 EPB41P11171 864 aaKnown RBP15.44■□□□□ 0.06
VPS33B-208ENST00000574755 VAV2P52735 878 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 ZNF131P52739 623 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 DCAF17Q5H9S7 520 aaPredicted RBP15.44■□□□□ 0.06
VPS33B-208ENST00000574755 ODR4Q5SWX8 454 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 GOLGA1Q92805 767 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 IFIH1Q9BYX4 1025 aaKnown RBP15.44■□□□□ 0.06
VPS33B-208ENST00000574755 ZSWIM4Q9H7M6 989 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 GPRC5DQ9NZD1 345 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 PHIPQ8WWQ0 1821 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 TGFB1I1O43294 461 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 H2AFXP16104 143 aaPredicted RBP15.44■□□□□ 0.06
VPS33B-208ENST00000574755 TDRD12Q587J7 1177 aaKnown RBP15.44■□□□□ 0.06
VPS33B-208ENST00000574755 ARHGEF16Q5VV41 709 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 TCERG1LQ5VWI1 586 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 STXBP4Q6ZWJ1 553 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 SRGAP1Q7Z6B7 1085 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 CEP112Q8N8E3 955 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 PDCD2LQ9BRP1 358 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 METTL14Q9HCE5 456 aaKnown RBP15.44■□□□□ 0.06
VPS33B-208ENST00000574755 PXMP2Q9NR77 195 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 RNF146Q9NTX7 359 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 TBC1D22BQ9NU19 505 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 PUF60Q9UHX1 559 aaKnown RBP15.44■□□□□ 0.06
VPS33B-208ENST00000574755 RIPK3Q9Y572 518 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 ZMYM2Q9UBW7 1377 aa15.44■□□□□ 0.06
VPS33B-208ENST00000574755 SLC16A3O15427 465 aaKnown RBP15.43■□□□□ 0.06
VPS33B-208ENST00000574755 AFPP02771 609 aaKnown RBP15.43■□□□□ 0.06
VPS33B-208ENST00000574755 GUCY2CP25092 1073 aa15.43■□□□□ 0.06
VPS33B-208ENST00000574755 CASP4P49662 377 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms