RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 RUFY4Q6ZNE9 571 aa18.68■□□□□ 0.58
TVP23B-207ENST00000574294 KRT25Q7Z3Z0 450 aa18.68■□□□□ 0.58
TVP23B-207ENST00000574294 TBCKQ8TEA7 893 aa18.68■□□□□ 0.58
TVP23B-207ENST00000574294 DNAJB3Q8WWF6 145 aa18.68■□□□□ 0.58
TVP23B-207ENST00000574294 BBXQ8WY36 941 aaPredicted RBP18.68■□□□□ 0.58
TVP23B-207ENST00000574294 FAM167AQ96KS9 214 aa18.68■□□□□ 0.58
TVP23B-207ENST00000574294 TSPYL2Q9H2G4 693 aaPredicted RBP18.68■□□□□ 0.58
TVP23B-207ENST00000574294 CHD7Q9P2D1 2997 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 CYP3A7-CYP3A51PA0A087WV96 503 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 WDR64B1ANS9 1081 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 CYP3A7P24462 503 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 MGAT3Q09327 533 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 ADGRE1Q14246 886 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 NONOQ15233 471 aaKnown RBP eCLIP18.67■□□□□ 0.58
TVP23B-207ENST00000574294 TCTN1Q2MV58 587 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 Q4G0T1 1027 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 SWSAP1Q6NVH7 229 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 CCDC60Q8IWA6 550 aaPredicted RBP18.67■□□□□ 0.58
TVP23B-207ENST00000574294 MYOCDQ8IZQ8 938 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 ZNF710Q8N1W2 664 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 RDM1Q8NG50 284 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 TOP1MTQ969P6 601 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 LENG9Q96B70 501 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 LARP6Q9BRS8 491 aaKnown RBP18.67■□□□□ 0.58
TVP23B-207ENST00000574294 TPCN1Q9ULQ1 816 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 CEP131Q9UPN4 1083 aa18.67■□□□□ 0.58
TVP23B-207ENST00000574294 MAFBQ9Y5Q3 323 aaPredicted RBP18.67■□□□□ 0.58
TVP23B-207ENST00000574294 M0R2N6 131 aa18.66■□□□□ 0.58
TVP23B-207ENST00000574294 ADAMTS3O15072 1205 aa18.66■□□□□ 0.58
TVP23B-207ENST00000574294 JAK3P52333 1124 aa18.66■□□□□ 0.58
TVP23B-207ENST00000574294 AK2P54819 239 aa18.66■□□□□ 0.58
TVP23B-207ENST00000574294 HTRA4P83105 476 aaPredicted RBP18.66■□□□□ 0.58
TVP23B-207ENST00000574294 FBXO47Q5MNV8 452 aa18.66■□□□□ 0.58
TVP23B-207ENST00000574294 MTHFD1LQ6UB35 978 aa18.66■□□□□ 0.58
TVP23B-207ENST00000574294 TSHZ1Q6ZSZ6 1077 aa18.66■□□□□ 0.58
TVP23B-207ENST00000574294 CKAP2LQ8IYA6 745 aa18.66■□□□□ 0.58
TVP23B-207ENST00000574294 TGS1Q96RS0 853 aaKnown RBP18.66■□□□□ 0.58
TVP23B-207ENST00000574294 NAP1L4Q99733 375 aaKnown RBP18.66■□□□□ 0.58
TVP23B-207ENST00000574294 FTHL17Q9BXU8 183 aa18.66■□□□□ 0.58
TVP23B-207ENST00000574294 SAMM50Q9Y512 469 aa18.66■□□□□ 0.58
TVP23B-207ENST00000574294 CDY2AQ9Y6F7 541 aa18.66■□□□□ 0.58
TVP23B-207ENST00000574294 KDM3AQ9Y4C1 1321 aa18.66■□□□□ 0.58
TVP23B-207ENST00000574294 DLL1O00548 723 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 MSH4O15457 936 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 GAS7O60861 476 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 GHRP10912 638 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 KLRC1P26715 233 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 LPIN1Q14693 890 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 ODR4Q5SWX8 454 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.65■□□□□ 0.581e-7■■■■□ 23.8
TVP23B-207ENST00000574294 ARNTL2Q8WYA1 636 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 SLC5A5Q92911 643 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 SAMD11Q96NU1 681 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 PHF20Q9BVI0 1012 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 TEKT3Q9BXF9 490 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 FAM49AQ9H0Q0 323 aaPredicted RBP18.65■□□□□ 0.58
TVP23B-207ENST00000574294 LMCD1Q9NZU5 365 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 TRPV2Q9Y5S1 764 aa18.65■□□□□ 0.58
TVP23B-207ENST00000574294 WDR81Q562E7 1941 aa18.64■□□□□ 0.58
TVP23B-207ENST00000574294 COL4A6Q14031 1691 aa18.64■□□□□ 0.57
TVP23B-207ENST00000574294 CCDC194A0A1B0GVG4 234 aa18.64■□□□□ 0.57
TVP23B-207ENST00000574294 MAGEB2O15479 319 aa18.64■□□□□ 0.57
TVP23B-207ENST00000574294 NEK4P51957 841 aa18.64■□□□□ 0.57
TVP23B-207ENST00000574294 ERVK-21P61565 698 aa18.64■□□□□ 0.57
TVP23B-207ENST00000574294 NPY5RQ15761 445 aa18.64■□□□□ 0.57
TVP23B-207ENST00000574294 LRCH2Q5VUJ6 765 aa18.64■□□□□ 0.57
TVP23B-207ENST00000574294 SP7Q8TDD2 431 aaPredicted RBP18.64■□□□□ 0.57
TVP23B-207ENST00000574294 SYMPKQ92797 1274 aaKnown RBP18.64■□□□□ 0.57
TVP23B-207ENST00000574294 CELF4Q9BZC1 486 aaKnown RBP18.64■□□□□ 0.57
TVP23B-207ENST00000574294 DISC1Q9NRI5 854 aa18.64■□□□□ 0.57
TVP23B-207ENST00000574294 NRBP2Q9NSY0 501 aa18.64■□□□□ 0.57
TVP23B-207ENST00000574294 SIP14410 1827 aa18.63■□□□□ 0.57
TVP23B-207ENST00000574294 EVPLQ92817 2033 aa18.63■□□□□ 0.57
TVP23B-207ENST00000574294 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.63■□□□□ 0.57
TVP23B-207ENST00000574294 LINC01553A4QN01 128 aa18.63■□□□□ 0.57
TVP23B-207ENST00000574294 GCFC2P16383 781 aaKnown RBP18.63■□□□□ 0.57
TVP23B-207ENST00000574294 TMCO2Q7Z6W1 182 aaPredicted RBP18.63■□□□□ 0.57
TVP23B-207ENST00000574294 MBOAT7Q96N66 472 aa18.63■□□□□ 0.57
TVP23B-207ENST00000574294 YME1L1Q96TA2 773 aa18.63■□□□□ 0.57
TVP23B-207ENST00000574294 BRMS1Q9HCU9 246 aa18.63■□□□□ 0.57
TVP23B-207ENST00000574294 ORC3Q9UBD5 711 aaPredicted RBP18.63■□□□□ 0.57
TVP23B-207ENST00000574294 IGSF9BQ9UPX0 1349 aa18.63■□□□□ 0.57
TVP23B-207ENST00000574294 PRRC2BQ5JSZ5 2229 aaKnown RBP18.63■□□□□ 0.57
TVP23B-207ENST00000574294 LCHNA4D1U4 455 aa18.62■□□□□ 0.57
TVP23B-207ENST00000574294 EDIL3O43854 480 aa18.62■□□□□ 0.57
TVP23B-207ENST00000574294 PSMD10O75832 226 aa18.62■□□□□ 0.57
TVP23B-207ENST00000574294 PPP4R3AQ6IN85 833 aa18.62■□□□□ 0.57
TVP23B-207ENST00000574294 FAM117BQ6P1L5 589 aa18.62■□□□□ 0.57
TVP23B-207ENST00000574294 TRAPPC12Q8WVT3 735 aa18.62■□□□□ 0.57
TVP23B-207ENST00000574294 ATXN2LQ8WWM7 1075 aaKnown RBP18.62■□□□□ 0.57
TVP23B-207ENST00000574294 GTF3C6Q969F1 213 aa18.62■□□□□ 0.57
TVP23B-207ENST00000574294 AIFM3Q96NN9 605 aa18.62■□□□□ 0.57
TVP23B-207ENST00000574294 CERS4Q9HA82 394 aa18.62■□□□□ 0.57
TVP23B-207ENST00000574294 GABBR1Q9UBS5 961 aa18.62■□□□□ 0.57
TVP23B-207ENST00000574294 MTCH2Q9Y6C9 303 aa18.62■□□□□ 0.57
TVP23B-207ENST00000574294 TTC3P53804 2025 aa18.62■□□□□ 0.57
TVP23B-207ENST00000574294 ATP4AP20648 1035 aa18.61■□□□□ 0.57
TVP23B-207ENST00000574294 TMOD1P28289 359 aa18.61■□□□□ 0.57
TVP23B-207ENST00000574294 PAK2Q13177 524 aa18.61■□□□□ 0.57
TVP23B-207ENST00000574294 NEK8Q86SG6 692 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms