RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 CCDC60Q8IWA6 550 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-209ENST00000573474 CCDC65Q8IXS2 484 aa15.23■□□□□ 0.03
CCDC40-209ENST00000573474 COPS5Q92905 334 aa15.23■□□□□ 0.03
CCDC40-209ENST00000573474 SPATA33Q96N06 139 aa15.23■□□□□ 0.03
CCDC40-209ENST00000573474 ARHGAP39Q9C0H5 1083 aa15.23■□□□□ 0.03
CCDC40-209ENST00000573474 ZNF302Q9NR11 478 aa15.23■□□□□ 0.03
CCDC40-209ENST00000573474 ZHX1Q9UKY1 873 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-209ENST00000573474 MAFBQ9Y5Q3 323 aaPredicted RBP15.23■□□□□ 0.03
CCDC40-209ENST00000573474 NPHP3-ACAD11A0A0J9YXS1 232 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 NOP56O00567 594 aaKnown RBP15.22■□□□□ 0.03
CCDC40-209ENST00000573474 ZNF862O60290 1169 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 IGHA2P01877 340 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 IDEP14735 1019 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 ADCYAP1R1P41586 468 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 PSMD2Q13200 908 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 GIT2Q14161 759 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 IQCB1Q15051 598 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 CCL14Q16627 93 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 DUSP28Q4G0W2 176 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 XKR3Q5GH77 459 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 EMID1Q96A84 441 aaPredicted RBP15.22■□□□□ 0.03
CCDC40-209ENST00000573474 CCDC43Q96MW1 224 aaKnown RBP15.22■□□□□ 0.03
CCDC40-209ENST00000573474 GPR20Q99678 358 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 RUSC1Q9BVN2 902 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 PANK4Q9NVE7 773 aa15.22■□□□□ 0.03
CCDC40-209ENST00000573474 IGSF9BQ9UPX0 1349 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 FRMD3A2A2Y4 597 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 SMTNL1A8MU46 457 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 BECN2A8MW95 431 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 PPP1R3GB7ZBB8 358 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 LGR5O75473 907 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 STBD1O95210 358 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 GUCY2CP25092 1073 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 HOXD10P28358 340 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 ERCC5P28715 1186 aaPredicted RBP15.21■□□□□ 0.03
CCDC40-209ENST00000573474 TCF7P36402 384 aaPredicted RBP15.21■□□□□ 0.03
CCDC40-209ENST00000573474 RARRES1P49788 294 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 STAT5BP51692 787 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 PRKCEQ02156 737 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 ARHGAP1Q07960 439 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 EHHADHQ08426 723 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 CCDC144BQ3MJ40 725 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 TMEM63BQ5T3F8 832 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 PADI6Q6TGC4 694 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 LUZP1Q86V48 1076 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 TRMT44Q8IYL2 757 aaKnown RBP15.21■□□□□ 0.03
CCDC40-209ENST00000573474 AFAP1L1Q8TED9 768 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 REEP2Q9BRK0 252 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 AZI2Q9H6S1 392 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 SAGE1Q9NXZ1 904 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 NRBP1Q9UHY1 535 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 GABRQQ9UN88 632 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 MCM3APO60318 1980 aa15.21■□□□□ 0.03
CCDC40-209ENST00000573474 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.2■□□□□ 0.02
CCDC40-209ENST00000573474 GPR25O00155 361 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 TBCAO75347 108 aaKnown RBP15.2■□□□□ 0.02
CCDC40-209ENST00000573474 ZNF865P0CJ78 1059 aaPredicted RBP15.2■□□□□ 0.02
CCDC40-209ENST00000573474 SMPD1P17405 629 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 CYP2C19P33261 490 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 PPP1R2P41236 205 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 FLT3LGP49771 235 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 TNFAIP2Q03169 654 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 RAD51AP2Q09MP3 1159 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 COASYQ13057 564 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 STIM1Q13586 685 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 HSDL1Q3SXM5 330 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 COBLL1Q53SF7 1204 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 XKR9Q5GH70 373 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 PRAMEF19Q5SWL8 479 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 UTP14CQ5TAP6 766 aaKnown RBP15.2■□□□□ 0.02
CCDC40-209ENST00000573474 ANO5Q75V66 913 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 PLPPR4Q7Z2D5 763 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 DHX40Q8IX18 779 aaKnown RBP15.2■□□□□ 0.02
CCDC40-209ENST00000573474 SMYD4Q8IYR2 804 aaPredicted RBP15.2■□□□□ 0.02
CCDC40-209ENST00000573474 PPTC7Q8NI37 304 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 PCYT2Q99447 389 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 TIPINQ9BVW5 301 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 NRBP2Q9NSY0 501 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 GDAQ9Y2T3 454 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 COL4A3BPQ9Y5P4 624 aa15.2■□□□□ 0.02
CCDC40-209ENST00000573474 DOCK3Q8IZD9 2030 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 MGAMO43451 1857 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 DOCK5Q9H7D0 1870 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 THSD7BQ9C0I4 1608 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 GOLGA6L19H0YKK7 550 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 IKBKBO14920 756 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 OATP04181 439 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 CD44P16070 742 aaKnown RBP15.19■□□□□ 0.02
CCDC40-209ENST00000573474 GAP43P17677 238 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 ATP4AP20648 1035 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-209ENST00000573474 PRKCZQ05513 592 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 STK4Q13043 487 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 HERC4Q5GLZ8 1057 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-209ENST00000573474 MFSD14CQ5VZR4 134 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 ADSSL1Q8N142 457 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 AOPEPQ8N6M6 819 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 FAM167AQ96KS9 214 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 CEP170P1Q96L14 293 aa15.19■□□□□ 0.02
CCDC40-209ENST00000573474 ODF2LQ9ULJ1 636 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms