RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ATRNL1Q5VV63 1379 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 SPRYD7Q5W111 196 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 C11orf57Q6ZUT1 292 aaPredicted RBP11.08□□□□□ -0.64
SMG6-213ENST00000573166 THNSL1Q8IYQ7 743 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 NUP58Q9BVL2 599 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 POLR3FQ9H1D9 316 aaPredicted RBP11.08□□□□□ -0.64
SMG6-213ENST00000573166 DENND3A2RUS2 1198 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 BTBD19C9JJ37 291 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 FOXN1O15353 648 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 RPA1P27694 616 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 SLC8A3P57103 927 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 GRIN1Q05586 938 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 TRIM14Q14142 442 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 TEX35Q5T0J7 233 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 PCNX4Q63HM2 1172 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 MOXD1Q6UVY6 613 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 MSANTD4Q8NCY6 345 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 CYP2W1Q8TAV3 490 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 TUBGCP2Q9BSJ2 902 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 LRFN2Q9ULH4 789 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 NUB1Q9Y5A7 615 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 MYPNQ86TC9 1320 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 DGAT1O75907 488 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 TOMM70O94826 608 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 TOB1P50616 345 aaPredicted RBP11.08□□□□□ -0.64
SMG6-213ENST00000573166 COASYQ13057 564 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 PGM5Q15124 567 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 DGKDQ16760 1214 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 VWA3BQ502W6 1294 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 PLA2G4FQ68DD2 849 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 BTNL9Q6UXG8 535 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 GBP6Q6ZN66 633 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 CAPNS2Q96L46 248 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 MMS19Q96T76 1030 aa11.08□□□□□ -0.64
SMG6-213ENST00000573166 KIF2AO00139 706 aaPredicted RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 P4HA1P13674 534 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 TCF7P36402 384 aaPredicted RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 NPEPPSP55786 919 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 TFAMQ00059 246 aaKnown RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 RGS22Q8NE09 1264 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 ARGLU1Q9NWB6 273 aaPredicted RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 ERAP1Q9NZ08 941 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 TRIM17Q9Y577 477 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 GOLGA8IPA6NC78 632 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 GOLGA8JA6NMD2 632 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 N4BP1O75113 896 aaKnown RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 HIP1RO75146 1068 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 ZBTB48P10074 688 aaPredicted RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 TNFAIP3P21580 790 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 FXR2P51116 673 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMG6-213ENST00000573166 KIF5AQ12840 1032 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 PPM1KQ8N3J5 372 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 KATNAL1Q9BW62 490 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 AFG3L2Q9Y4W6 797 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 GOLGA6L9A6NEM1 432 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 CLDN3O15551 220 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 XPOTO43592 962 aaKnown RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 URI1O94763 535 aaPredicted RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 PRR29P0C7W0 189 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 KRT83P78385 493 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 FMR1Q06787 632 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMG6-213ENST00000573166 PRPF4BQ13523 1007 aaKnown RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 EARS2Q5JPH6 523 aaKnown RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 TWF2Q6IBS0 349 aaKnown RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 ZNF746Q6NUN9 644 aaPredicted RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 ARMCX2Q7L311 632 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 TEX2Q8IWB9 1127 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 RNF149Q8NC42 400 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 TMEM143Q96AN5 459 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 ZBTB9Q96C00 473 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 GLT1D1Q96MS3 346 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 MSTO1Q9BUK6 570 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 LSM14BQ9BX40 385 aaKnown RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 C1orf112Q9NSG2 853 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 SEL1LQ9UBV2 794 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 TACC3Q9Y6A5 838 aa11.07□□□□□ -0.64
SMG6-213ENST00000573166 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.07□□□□□ -0.64
SMG6-213ENST00000573166 NUP188Q5SRE5 1749 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 ALDH5A1P51649 535 aaPredicted RBP11.06□□□□□ -0.64
SMG6-213ENST00000573166 SP3Q02447 781 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 RNASELQ05823 741 aaKnown RBP11.06□□□□□ -0.64
SMG6-213ENST00000573166 IFI16Q16666 785 aaKnown RBP11.06□□□□□ -0.64
SMG6-213ENST00000573166 RRAGAQ7L523 313 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 RNF180Q86T96 592 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 SOCS4Q8WXH5 440 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 BAG1Q99933 345 aaPredicted RBP11.06□□□□□ -0.64
SMG6-213ENST00000573166 CCDC94Q9BW85 323 aaPredicted RBP11.06□□□□□ -0.64
SMG6-213ENST00000573166 TRIM9Q9C026 710 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.06□□□□□ -0.64
SMG6-213ENST00000573166 V9GYY5 206 aaPredicted RBP11.06□□□□□ -0.64
SMG6-213ENST00000573166 CPT1AP50416 773 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 GNG11P61952 73 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 ASIC2Q16515 512 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 SPECC1LQ69YQ0 1117 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 SLFN12LQ6IEE8 588 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 KIF18AQ8NI77 898 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 UNC45AQ9H3U1 944 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 ABHD16BQ9H3Z7 469 aa11.06□□□□□ -0.64
SMG6-213ENST00000573166 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.06□□□□□ -0.64
SMG6-213ENST00000573166 TJP1Q07157 1748 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms