RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 CAMK1Q14012 370 aa20.03■□□□□ 0.8
CIITA-206ENST00000571190 BTG3Q14201 252 aaPredicted RBP20.03■□□□□ 0.8
CIITA-206ENST00000571190 CTC1Q2NKJ3 1217 aa20.03■□□□□ 0.8
CIITA-206ENST00000571190 ABHD15Q6UXT9 468 aa20.03■□□□□ 0.8
CIITA-206ENST00000571190 CRYGNQ8WXF5 182 aa20.03■□□□□ 0.8
CIITA-206ENST00000571190 C11orf84Q9BUA3 381 aaPredicted RBP20.03■□□□□ 0.8
CIITA-206ENST00000571190 IGSF9BQ9UPX0 1349 aa20.02■□□□□ 0.8
CIITA-206ENST00000571190 SMIM35A0A1B0GVV1 85 aa20.02■□□□□ 0.8
CIITA-206ENST00000571190 FAM86B1E9PN63 330 aa20.02■□□□□ 0.8
CIITA-206ENST00000571190 hCG_1984214I3L0E3 225 aa20.02■□□□□ 0.8
CIITA-206ENST00000571190 RPLP2P05387 115 aaKnown RBP20.02■□□□□ 0.8
CIITA-206ENST00000571190 FAM86B2P0C5J1 330 aa20.02■□□□□ 0.8
CIITA-206ENST00000571190 ADD1P35611 737 aaKnown RBP20.02■□□□□ 0.8
CIITA-206ENST00000571190 HYAL1Q12794 435 aa20.02■□□□□ 0.8
CIITA-206ENST00000571190 AP3B2Q13367 1082 aa20.02■□□□□ 0.8
CIITA-206ENST00000571190 PUS10Q3MIT2 529 aaKnown RBP20.02■□□□□ 0.8
CIITA-206ENST00000571190 MTHFD1LQ6UB35 978 aa20.02■□□□□ 0.8
CIITA-206ENST00000571190 ZNF713Q8N859 430 aaPredicted RBP20.02■□□□□ 0.8
CIITA-206ENST00000571190 CELF4Q9BZC1 486 aaKnown RBP20.02■□□□□ 0.8
CIITA-206ENST00000571190 LMAN2LQ9H0V9 348 aa20.02■□□□□ 0.8
CIITA-206ENST00000571190 TMX1Q9H3N1 280 aa20.02■□□□□ 0.8
CIITA-206ENST00000571190 MRPL42Q9Y6G3 142 aaKnown RBP20.02■□□□□ 0.8
CIITA-206ENST00000571190 DOCK5Q9H7D0 1870 aa20.02■□□□□ 0.8
CIITA-206ENST00000571190 KDM3AQ9Y4C1 1321 aa20.02■□□□□ 0.79
CIITA-206ENST00000571190 IGLV3-22A0A075B6J6 115 aa20.01■□□□□ 0.79
CIITA-206ENST00000571190 CPA1P15085 419 aa20.01■□□□□ 0.79
CIITA-206ENST00000571190 DLX2Q07687 328 aaPredicted RBP20.01■□□□□ 0.79
CIITA-206ENST00000571190 NIPA1Q7RTP0 329 aa20.01■□□□□ 0.79
CIITA-206ENST00000571190 CDHR5Q9HBB8 845 aa20.01■□□□□ 0.79
CIITA-206ENST00000571190 CLDND1Q9NY35 253 aa20.01■□□□□ 0.79
CIITA-206ENST00000571190 RWDD3Q9Y3V2 267 aa20.01■□□□□ 0.79
CIITA-206ENST00000571190 DDX39AO00148 427 aaKnown RBP20■□□□□ 0.79
CIITA-206ENST00000571190 ATP4AP20648 1035 aa20■□□□□ 0.79
CIITA-206ENST00000571190 KLRC1P26715 233 aa20■□□□□ 0.79
CIITA-206ENST00000571190 GTF2F1P35269 517 aaKnown RBP eCLIP20■□□□□ 0.79
CIITA-206ENST00000571190 SLC26A2P50443 739 aa20■□□□□ 0.79
CIITA-206ENST00000571190 RCAN1P53805 252 aa20■□□□□ 0.79
CIITA-206ENST00000571190 PFKFB3Q16875 520 aaPredicted RBP20■□□□□ 0.79
CIITA-206ENST00000571190 JAKMIP3Q5VZ66 844 aa20■□□□□ 0.79
CIITA-206ENST00000571190 EP400NLQ6ZTU2 488 aa20■□□□□ 0.79
CIITA-206ENST00000571190 NPAS4Q8IUM7 802 aa20■□□□□ 0.79
CIITA-206ENST00000571190 CCDC60Q8IWA6 550 aaPredicted RBP20■□□□□ 0.79
CIITA-206ENST00000571190 NME8Q8N427 588 aa20■□□□□ 0.79
CIITA-206ENST00000571190 KCNB2Q92953 911 aa20■□□□□ 0.79
CIITA-206ENST00000571190 TNPO1Q92973 898 aaKnown RBP20■□□□□ 0.79
CIITA-206ENST00000571190 UIMC1Q96RL1 719 aa20■□□□□ 0.79
CIITA-206ENST00000571190 PLVAPQ9BX97 442 aa20■□□□□ 0.79
CIITA-206ENST00000571190 FTHL17Q9BXU8 183 aa20■□□□□ 0.79
CIITA-206ENST00000571190 ALG13Q9NP73 1137 aaKnown RBP20■□□□□ 0.79
CIITA-206ENST00000571190 PLAGL2Q9UPG8 496 aa20■□□□□ 0.79
CIITA-206ENST00000571190 ZBTB42B2RXF5 422 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 MGEA5O60502 916 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 MMP1P03956 469 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 CYP3A4P08684 503 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 DNAJB1P25685 340 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 GATMP50440 423 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 KRT76Q01546 638 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 ZP2Q05996 745 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 TMEM266Q2M3C6 531 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 CENPQQ7L2Z9 268 aaPredicted RBP19.99■□□□□ 0.79
CIITA-206ENST00000571190 PLA2G4DQ86XP0 818 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 CMTR2Q8IYT2 770 aaKnown RBP19.99■□□□□ 0.79
CIITA-206ENST00000571190 KIAA0319LQ8IZA0 1049 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 ATP8B4Q8TF62 1192 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 TMEM40Q8WWA1 233 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 FAM122AQ96E09 287 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 GLT8D2Q9H1C3 349 aa19.99■□□□□ 0.79
CIITA-206ENST00000571190 C19orf67A6NJJ6 358 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 M0QZ92 97 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 LINC01565O15544 149 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 HBP1O60381 514 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 ITGB1P05556 798 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 SCG2P13521 617 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 SSTR3P32745 418 aaPredicted RBP19.98■□□□□ 0.79
CIITA-206ENST00000571190 ZNF76P36508 570 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 APOBRQ0VD83 1088 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 PAK2Q13177 524 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 KRT32Q14532 448 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 PKN1Q16512 942 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 SPPL3Q8TCT6 385 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 P2RX5Q93086 422 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 ERVK-5Q9HDB9 667 aa19.98■□□□□ 0.79
CIITA-206ENST00000571190 ESYT2A0FGR8 921 aa19.97■□□□□ 0.79
CIITA-206ENST00000571190 IPO5O00410 1097 aaKnown RBP19.97■□□□□ 0.79
CIITA-206ENST00000571190 BACH1O14867 736 aa19.97■□□□□ 0.79
CIITA-206ENST00000571190 NCK2O43639 380 aa19.97■□□□□ 0.79
CIITA-206ENST00000571190 CDC45O75419 566 aa19.97■□□□□ 0.79
CIITA-206ENST00000571190 CSPG5O95196 566 aa19.97■□□□□ 0.79
CIITA-206ENST00000571190 PAN2Q504Q3 1202 aaKnown RBP19.97■□□□□ 0.79
CIITA-206ENST00000571190 SWSAP1Q6NVH7 229 aa19.97■□□□□ 0.79
CIITA-206ENST00000571190 ZMYND12Q9H0C1 365 aa19.97■□□□□ 0.79
CIITA-206ENST00000571190 ZNF302Q9NR11 478 aa19.97■□□□□ 0.79
CIITA-206ENST00000571190 NOC2LQ9Y3T9 749 aaKnown RBP19.97■□□□□ 0.79
CIITA-206ENST00000571190 ARIH1Q9Y4X5 557 aaPredicted RBP19.97■□□□□ 0.79
CIITA-206ENST00000571190 BRWD1Q9NSI6 2320 aa19.97■□□□□ 0.79
CIITA-206ENST00000571190 EDIL3O43854 480 aa19.96■□□□□ 0.79
CIITA-206ENST00000571190 TBX10O75333 385 aa19.96■□□□□ 0.79
CIITA-206ENST00000571190 HMGB1P09429 215 aaKnown RBP19.96■□□□□ 0.79
CIITA-206ENST00000571190 STAG3L1P0CL83 205 aa19.96■□□□□ 0.79
CIITA-206ENST00000571190 IRS1P35568 1242 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms