RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 FAM86B2P0C5J1 330 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 CPA1P15085 419 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 IL9P15248 144 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 RCAN1P53805 252 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 TMEM62Q0P6H9 643 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 AP3B2Q13367 1082 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 KRT32Q14532 448 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 PTCRAQ6ISU1 281 aaPredicted RBP16.85■□□□□ 0.29
NDE1-203ENST00000570727 POTEBQ6S5H4 581 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 ABHD15Q6UXT9 468 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 CRYGNQ8WXF5 182 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 KCNB2Q92953 911 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 TNPO1Q92973 898 aaKnown RBP16.85■□□□□ 0.29
NDE1-203ENST00000570727 PABPC5Q96DU9 382 aaKnown RBP16.85■□□□□ 0.29
NDE1-203ENST00000570727 LRFN3Q9BTN0 628 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 CELF4Q9BZC1 486 aaKnown RBP16.85■□□□□ 0.29
NDE1-203ENST00000570727 GLT8D2Q9H1C3 349 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 NSUN3Q9H649 340 aaKnown RBP16.85■□□□□ 0.29
NDE1-203ENST00000570727 PADI3Q9ULW8 664 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 TRPV2Q9Y5S1 764 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 ADGRA3Q8IWK6 1321 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 TRIOO75962 3097 aa16.85■□□□□ 0.29
NDE1-203ENST00000570727 IGLV3-22A0A075B6J6 115 aa16.84■□□□□ 0.29
NDE1-203ENST00000570727 SMIM35A0A1B0GVV1 85 aa16.84■□□□□ 0.29
NDE1-203ENST00000570727 PI4K2BG5E9Z4 385 aa16.84■□□□□ 0.29
NDE1-203ENST00000570727 CDC45O75419 566 aa16.84■□□□□ 0.29
NDE1-203ENST00000570727 KLRC1P26715 233 aa16.84■□□□□ 0.29
NDE1-203ENST00000570727 BTG3Q14201 252 aaPredicted RBP16.84■□□□□ 0.29
NDE1-203ENST00000570727 PFKFB3Q16875 520 aaPredicted RBP16.84■□□□□ 0.29
NDE1-203ENST00000570727 JAKMIP3Q5VZ66 844 aa16.84■□□□□ 0.29
NDE1-203ENST00000570727 MTHFD1LQ6UB35 978 aa16.84■□□□□ 0.29
NDE1-203ENST00000570727 NME8Q8N427 588 aa16.84■□□□□ 0.29
NDE1-203ENST00000570727 C11orf16Q9NQ32 467 aa16.84■□□□□ 0.29
NDE1-203ENST00000570727 IGSF9BQ9UPX0 1349 aa16.84■□□□□ 0.29
NDE1-203ENST00000570727 CYP3A4P08684 503 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 HMGB1P09429 215 aaKnown RBP16.83■□□□□ 0.28
NDE1-203ENST00000570727 ATP4AP20648 1035 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 MYH9P35579 1960 aaKnown RBP16.83■□□□□ 0.28
NDE1-203ENST00000570727 ZNF76P36508 570 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 LTBRP36941 435 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 SLC26A2P50443 739 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 APOBRQ0VD83 1088 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 PKN1Q16512 942 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 CTC1Q2NKJ3 1217 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 PLA2G4DQ86XP0 818 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 GJD3Q8N144 294 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 UIMC1Q96RL1 719 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 C11orf84Q9BUA3 381 aaPredicted RBP16.83■□□□□ 0.28
NDE1-203ENST00000570727 FTHL17Q9BXU8 183 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 TMX1Q9H3N1 280 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 CDHR5Q9HBB8 845 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 RWDD3Q9Y3V2 267 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 KDM3AQ9Y4C1 1321 aa16.83■□□□□ 0.28
NDE1-203ENST00000570727 KIAA1671Q9BY89 1806 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 M0QZ92 97 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 DDX39AO00148 427 aaKnown RBP16.82■□□□□ 0.28
NDE1-203ENST00000570727 HBP1O60381 514 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 GPR37L1O60883 481 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 SCG2P13521 617 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 METAP2P50579 478 aaKnown RBP eCLIP16.82■□□□□ 0.28
NDE1-203ENST00000570727 KRT76Q01546 638 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 CAMK1Q14012 370 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 PUS10Q3MIT2 529 aaKnown RBP16.82■□□□□ 0.28
NDE1-203ENST00000570727 Q6ZUG5 572 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 CCDC60Q8IWA6 550 aaPredicted RBP16.82■□□□□ 0.28
NDE1-203ENST00000570727 KIAA0319LQ8IZA0 1049 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 ZMYND12Q9H0C1 365 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 LMAN2LQ9H0V9 348 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 NAP1L2Q9ULW6 460 aaPredicted RBP16.82■□□□□ 0.28
NDE1-203ENST00000570727 PLAGL2Q9UPG8 496 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 MRPL42Q9Y6G3 142 aaKnown RBP16.82■□□□□ 0.28
NDE1-203ENST00000570727 WDR81Q562E7 1941 aa16.82■□□□□ 0.28
NDE1-203ENST00000570727 ESYT2A0FGR8 921 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 ZBTB42B2RXF5 422 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 IPO5O00410 1097 aaKnown RBP16.81■□□□□ 0.28
NDE1-203ENST00000570727 BACH1O14867 736 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 HYAL1Q12794 435 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 TMEM266Q2M3C6 531 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 TMEM31Q5JXX7 168 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 SWSAP1Q6NVH7 229 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 EP400NLQ6ZTU2 488 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 NPAS4Q8IUM7 802 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 CMTR2Q8IYT2 770 aaKnown RBP16.81■□□□□ 0.28
NDE1-203ENST00000570727 ATP8B4Q8TF62 1192 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 PLVAPQ9BX97 442 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 ALG13Q9NP73 1137 aaKnown RBP16.81■□□□□ 0.28
NDE1-203ENST00000570727 CLDND1Q9NY35 253 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 SNX14Q9Y5W7 946 aa16.81■□□□□ 0.28
NDE1-203ENST00000570727 CCDC196A0A1B0GTZ2 297 aa16.8■□□□□ 0.28
NDE1-203ENST00000570727 FAM86C2PA6NEL3 165 aa16.8■□□□□ 0.28
NDE1-203ENST00000570727 PRPF3O43395 683 aaKnown RBP16.8■□□□□ 0.28
NDE1-203ENST00000570727 NCK2O43639 380 aa16.8■□□□□ 0.28
NDE1-203ENST00000570727 EDIL3O43854 480 aa16.8■□□□□ 0.28
NDE1-203ENST00000570727 MGEA5O60502 916 aa16.8■□□□□ 0.28
NDE1-203ENST00000570727 DNAJB1P25685 340 aa16.8■□□□□ 0.28
NDE1-203ENST00000570727 HSPA4P34932 840 aa16.8■□□□□ 0.28
NDE1-203ENST00000570727 GTF2F1P35269 517 aaKnown RBP eCLIP16.8■□□□□ 0.28
NDE1-203ENST00000570727 DLX2Q07687 328 aaPredicted RBP16.8■□□□□ 0.28
NDE1-203ENST00000570727 PAK2Q13177 524 aa16.8■□□□□ 0.28
NDE1-203ENST00000570727 ZNF484Q5JVG2 852 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms