RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 AZI2Q9H6S1 392 aa17.15■□□□□ 0.34
RAB40B-203ENST00000570676 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.14■□□□□ 0.33
RAB40B-203ENST00000570676 LINC01553A4QN01 128 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 EDIL3O43854 480 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 LPXNO60711 386 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 AMHP03971 560 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 IGBP1P78318 339 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 SETQ01105 290 aaPredicted RBP17.14■□□□□ 0.33
RAB40B-203ENST00000570676 AKAP17AQ02040 695 aaKnown RBP17.14■□□□□ 0.33
RAB40B-203ENST00000570676 CCDC85BQ15834 202 aaPredicted RBP17.14■□□□□ 0.33
RAB40B-203ENST00000570676 FAM117BQ6P1L5 589 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 ABHD15Q6UXT9 468 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 CCDC60Q8IWA6 550 aaPredicted RBP17.14■□□□□ 0.33
RAB40B-203ENST00000570676 MYOCDQ8IZQ8 938 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 NSUN7Q8NE18 718 aaKnown RBP17.14■□□□□ 0.33
RAB40B-203ENST00000570676 TRAPPC12Q8WVT3 735 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 APBB2Q92870 758 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 LENG9Q96B70 501 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 RAD9AQ99638 391 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 SMC3Q9UQE7 1217 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 MTCH2Q9Y6C9 303 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 KIAA1671Q9BY89 1806 aa17.14■□□□□ 0.33
RAB40B-203ENST00000570676 EVPLQ92817 2033 aa17.13■□□□□ 0.33
RAB40B-203ENST00000570676 RRN3P2A6NIE6 340 aa17.13■□□□□ 0.33
RAB40B-203ENST00000570676 IPO5O00410 1097 aaKnown RBP17.13■□□□□ 0.33
RAB40B-203ENST00000570676 JAK2O60674 1132 aa17.13■□□□□ 0.33
RAB40B-203ENST00000570676 CIITAP33076 1130 aa17.13■□□□□ 0.33
RAB40B-203ENST00000570676 STAT5BP51692 787 aa17.13■□□□□ 0.33
RAB40B-203ENST00000570676 HTRA4P83105 476 aaPredicted RBP17.13■□□□□ 0.33
RAB40B-203ENST00000570676 GRB10Q13322 594 aa17.13■□□□□ 0.33
RAB40B-203ENST00000570676 LPIN1Q14693 890 aa17.13■□□□□ 0.33
RAB40B-203ENST00000570676 KRT40Q6A162 431 aa17.13■□□□□ 0.33
RAB40B-203ENST00000570676 SP7Q8TDD2 431 aaPredicted RBP17.13■□□□□ 0.33
RAB40B-203ENST00000570676 DNAJB3Q8WWF6 145 aa17.13■□□□□ 0.33
RAB40B-203ENST00000570676 IFIH1Q9BYX4 1025 aaKnown RBP17.13■□□□□ 0.33
RAB40B-203ENST00000570676 SH3GLB2Q9NR46 395 aa17.13■□□□□ 0.33
RAB40B-203ENST00000570676 THEGQ9P2T0 379 aa17.13■□□□□ 0.33
RAB40B-203ENST00000570676 TRPC6Q9Y210 931 aa17.13■□□□□ 0.33
RAB40B-203ENST00000570676 GHRP10912 638 aa17.12■□□□□ 0.33
RAB40B-203ENST00000570676 MRPS6P82932 125 aaKnown RBP17.12■□□□□ 0.33
RAB40B-203ENST00000570676 SSRP1Q08945 709 aaKnown RBP17.12■□□□□ 0.33
RAB40B-203ENST00000570676 TRIM22Q8IYM9 498 aa17.12■□□□□ 0.33
RAB40B-203ENST00000570676 MICALL1Q8N3F8 863 aa17.12■□□□□ 0.33
RAB40B-203ENST00000570676 BICD2Q8TD16 824 aa17.12■□□□□ 0.33
RAB40B-203ENST00000570676 GDPD5Q8WTR4 605 aa17.12■□□□□ 0.33
RAB40B-203ENST00000570676 UIMC1Q96RL1 719 aa17.12■□□□□ 0.33
RAB40B-203ENST00000570676 CDY2AQ9Y6F7 541 aa17.12■□□□□ 0.33
RAB40B-203ENST00000570676 CUL9Q8IWT3 2517 aa17.12■□□□□ 0.33
RAB40B-203ENST00000570676 TTC3P53804 2025 aa17.11■□□□□ 0.33
RAB40B-203ENST00000570676 POTEB3A0JP26 581 aa17.11■□□□□ 0.33
RAB40B-203ENST00000570676 DEXIO95424 95 aa17.11■□□□□ 0.33
RAB40B-203ENST00000570676 SLC26A2P50443 739 aa17.11■□□□□ 0.33
RAB40B-203ENST00000570676 ERVK-21P61565 698 aa17.11■□□□□ 0.33
RAB40B-203ENST00000570676 HMGN5P82970 282 aaKnown RBP17.11■□□□□ 0.33
RAB40B-203ENST00000570676 NPY5RQ15761 445 aa17.11■□□□□ 0.33
RAB40B-203ENST00000570676 FBXO47Q5MNV8 452 aa17.11■□□□□ 0.33
RAB40B-203ENST00000570676 POTEBQ6S5H4 581 aa17.11■□□□□ 0.33
RAB40B-203ENST00000570676 RSPH3Q86UC2 560 aa17.11■□□□□ 0.33
RAB40B-203ENST00000570676 TOP1MTQ969P6 601 aa17.11■□□□□ 0.33
RAB40B-203ENST00000570676 TGS1Q96RS0 853 aaKnown RBP17.11■□□□□ 0.33
RAB40B-203ENST00000570676 ZNF577Q9BSK1 485 aa17.11■□□□□ 0.33
RAB40B-203ENST00000570676 FAM49AQ9H0Q0 323 aaPredicted RBP17.11■□□□□ 0.33
RAB40B-203ENST00000570676 ORC3Q9UBD5 711 aaPredicted RBP17.11■□□□□ 0.33
RAB40B-203ENST00000570676 PRUNE2Q8WUY3 3088 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 GTPBP6O43824 516 aaPredicted RBP17.1■□□□□ 0.33
RAB40B-203ENST00000570676 RPLP2P05387 115 aaKnown RBP17.1■□□□□ 0.33
RAB40B-203ENST00000570676 ATP4AP20648 1035 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 GJB2P29033 226 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 PRR16Q569H4 304 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 TJAP1Q5JTD0 557 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 FAM160B1Q5W0V3 765 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 ZNF746Q6NUN9 644 aaPredicted RBP17.1■□□□□ 0.33
RAB40B-203ENST00000570676 TSHZ1Q6ZSZ6 1077 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 DAGLBQ8NCG7 672 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 ATP8B4Q8TF62 1192 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 AIFM3Q96NN9 605 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 ZNF302Q9NR11 478 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 TBC1D22BQ9NU19 505 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 MTUS1Q9ULD2 1270 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 INSL6Q9Y581 213 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 PCDHA2Q9Y5H9 948 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 STK36Q9NRP7 1315 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 IGSF9BQ9UPX0 1349 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 COL1A2P08123 1366 aa17.1■□□□□ 0.33
RAB40B-203ENST00000570676 SMIM35A0A1B0GVV1 85 aa17.09■□□□□ 0.33
RAB40B-203ENST00000570676 ZBTB42B2RXF5 422 aa17.09■□□□□ 0.33
RAB40B-203ENST00000570676 M0R2N6 131 aa17.09■□□□□ 0.33
RAB40B-203ENST00000570676 BACH1O14867 736 aa17.09■□□□□ 0.33
RAB40B-203ENST00000570676 FDPSP14324 419 aaKnown RBP17.09■□□□□ 0.33
RAB40B-203ENST00000570676 NLRP5P59047 1200 aa17.09■□□□□ 0.33
RAB40B-203ENST00000570676 MIS18BP1Q6P0N0 1132 aa17.09■□□□□ 0.33
RAB40B-203ENST00000570676 MTHFD1LQ6UB35 978 aa17.09■□□□□ 0.33
RAB40B-203ENST00000570676 SMAP1Q8IYB5 467 aaPredicted RBP17.09■□□□□ 0.33
RAB40B-203ENST00000570676 FAM184AQ8NB25 1140 aa17.09■□□□□ 0.33
RAB40B-203ENST00000570676 ATXN2LQ8WWM7 1075 aaKnown RBP17.09■□□□□ 0.33
RAB40B-203ENST00000570676 LINC01599Q8WXQ3 324 aa17.09■□□□□ 0.33
RAB40B-203ENST00000570676 TNPO1Q92973 898 aaKnown RBP17.09■□□□□ 0.33
RAB40B-203ENST00000570676 C17orf80Q9BSJ5 609 aa17.09■□□□□ 0.33
RAB40B-203ENST00000570676 AGO3Q9H9G7 860 aaKnown RBP17.09■□□□□ 0.33
RAB40B-203ENST00000570676 SUGCTQ9HAC7 445 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms