RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ARIH2O95376 493 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 INHAP05111 366 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 RARBP10826 455 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 CYBAP13498 195 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 CPT1AP50416 773 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 ACTR2P61160 394 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 CYP4A11Q02928 519 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 GRIN1Q05586 938 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 SPIRE1Q08AE8 756 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 SEMA3FQ13275 785 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 LAMC2Q13753 1193 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 PDIA5Q14554 519 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 KARSQ15046 597 aaKnown RBP7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 EPHA7Q15375 998 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 DUSP28Q4G0W2 176 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 CELF3Q5SZQ8 465 aaKnown RBP7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 AXDND1Q5T1B0 1012 aaPredicted RBP7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 RRAGBQ5VZM2 374 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 IQSEC1Q6DN90 963 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 SHC4Q6S5L8 630 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 CTU1Q7Z7A3 348 aaKnown RBP7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 CKAP2LQ8IYA6 745 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 PDILTQ8N807 584 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 IQUBQ8NA54 791 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 ANKK1Q8NFD2 765 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 SPIRE2Q8WWL2 714 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 DHX58Q96C10 678 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 LRCH3Q96II8 777 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 EPSTI1Q96J88 318 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 LXNQ9BS40 222 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 MAGEF1Q9HAY2 307 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 TUFT1Q9NNX1 390 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 PDGFCQ9NRA1 345 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 LMBRD1Q9NUN5 540 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 STK17AQ9UEE5 414 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 DDX41Q9UJV9 622 aaKnown RBP7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 ZNF215Q9UL58 517 aaPredicted RBP7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 KCNH3Q9ULD8 1083 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 PCDHA10Q9Y5I2 948 aa7.37□□□□□ -1.23
CTDNEP1-204ENST00000570484 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 RBM47A0AV96 593 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 SEPT4O43236 478 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 ZEB2O60315 1214 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 ATP9AO75110 1047 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 SSBP05455 408 aaKnown RBP eCLIP7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 P4HBP07237 508 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 SUPT20HL2P0C7V6 817 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 ZNF865P0CJ78 1059 aaPredicted RBP7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 SMPD1P17405 629 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 PLCG1P19174 1290 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 MUTP22033 750 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 RPA1P27694 616 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 CDC25AP30304 524 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 TCF7P36402 384 aaPredicted RBP7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 NDUFA8P51970 172 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 LBX1P52954 281 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 PSMC5P62195 406 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 CACNB2Q08289 660 aaPredicted RBP7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 IL17AQ16552 155 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 TUSC1Q2TAM9 212 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 KLHL40Q2TBA0 621 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 PRAMEF19Q5SWL8 479 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 UTP14CQ5TAP6 766 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 TAPT1Q6NXT6 567 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 CCDC62Q6P9F0 684 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 TPH2Q8IWU9 490 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 BANK1Q8NDB2 785 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 CNNM3Q8NE01 707 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 PPTC7Q8NI37 304 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 SEPT1Q8WYJ6 367 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 GLG1Q92896 1179 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 WNT2BQ93097 391 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 DYDC2Q96IM9 177 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 FAM167AQ96KS9 214 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 PLIN2Q99541 437 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 EIF2AK1Q9BQI3 630 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 CCSER1Q9C0I3 900 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 KATNBL1Q9H079 304 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 NUP62CLQ9H1M0 184 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 CUEDC2Q9H467 287 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 GOLPH3LQ9H4A5 285 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 ZSWIM4Q9H7M6 989 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 HMX1Q9NP08 348 aaPredicted RBP7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 ZNF302Q9NR11 478 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 DACT1Q9NYF0 836 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 GABBR1Q9UBS5 961 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 USP25Q9UHP3 1055 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 PTPN22Q9Y2R2 807 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 ZSWIM8A7E2V4 1837 aa7.36□□□□□ -1.23
CTDNEP1-204ENST00000570484 LCTP09848 1927 aa7.35□□□□□ -1.23
CTDNEP1-204ENST00000570484 EMSYQ7Z589 1322 aa7.35□□□□□ -1.23
CTDNEP1-204ENST00000570484 IGSF9BQ9UPX0 1349 aa7.35□□□□□ -1.23
CTDNEP1-204ENST00000570484 ARHGEF35A5YM69 484 aa7.35□□□□□ -1.23
CTDNEP1-204ENST00000570484 EML1O00423 815 aa7.35□□□□□ -1.23
CTDNEP1-204ENST00000570484 POLR2DO15514 142 aaKnown RBP7.35□□□□□ -1.23
CTDNEP1-204ENST00000570484 DHX15O43143 795 aaKnown RBP7.35□□□□□ -1.23
CTDNEP1-204ENST00000570484 DYNC1LI2O43237 492 aaPredicted RBP7.35□□□□□ -1.23
CTDNEP1-204ENST00000570484 TRAK2O60296 914 aa7.35□□□□□ -1.23
CTDNEP1-204ENST00000570484 DUSP11O75319 330 aaKnown RBP7.35□□□□□ -1.23
CTDNEP1-204ENST00000570484 MED24O75448 989 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms