RNA–Protein interactions for RNA: ENST00000568740.5

TCF4-241, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-241ENST00000568740 TMEM150BA6NC51 233 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 IKBKBO14920 756 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 TPM4P67936 248 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 BRD3Q15059 726 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 ARMCX5Q6P1M9 558 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 SARM1Q6SZW1 724 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 SV2BQ7L1I2 683 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 LRRC8AQ8IWT6 810 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 SULF1Q8IWU6 871 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 TPH2Q8IWU9 490 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 PGBD3Q8N328 593 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 ETNPPLQ8TBG4 499 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 DCPSQ96C86 337 aaKnown RBP9.52□□□□□ -0.89
TCF4-241ENST00000568740 CCDC34Q96HJ3 373 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 SH2D4AQ9H788 454 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 GEMIN8Q9NWZ8 242 aaKnown RBP9.52□□□□□ -0.89
TCF4-241ENST00000568740 TAB2Q9NYJ8 693 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 LZTS1Q9Y250 596 aa9.52□□□□□ -0.89
TCF4-241ENST00000568740 TRAF5O00463 557 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 SREBF1P36956 1147 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 FXR2P51116 673 aaKnown RBP eCLIP9.51□□□□□ -0.89
TCF4-241ENST00000568740 RPS6P62753 249 aaKnown RBP9.51□□□□□ -0.89
TCF4-241ENST00000568740 SIM2Q14190 667 aaPredicted RBP9.51□□□□□ -0.89
TCF4-241ENST00000568740 NELFCDQ8IXH7 590 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 CRYGNQ8WXF5 182 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 TRERF1Q96PN7 1200 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 BPIFA3Q9BQP9 254 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 KIAA1683Q9H0B3 1180 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 PPCSQ9HAB8 311 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 KCNMB3Q9NPA1 279 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 CREBZFQ9NS37 354 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 PSME4Q14997 1843 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 GOLGA6L6A8MZA4 724 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 VWA5AO00534 786 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 SKILP12757 684 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 ITGB5P18084 799 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 RRM1P23921 792 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 USP11P51784 963 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 NOLC1Q14978 699 aaKnown RBP eCLIP9.51□□□□□ -0.89
TCF4-241ENST00000568740 ZNF658Q5TYW1 1059 aaPredicted RBP9.51□□□□□ -0.89
TCF4-241ENST00000568740 DCAF15Q66K64 600 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 SNRNP48Q6IEG0 339 aaKnown RBP9.51□□□□□ -0.89
TCF4-241ENST00000568740 KIAA0895Q8NCT3 520 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 MYRIPQ8NFW9 859 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 SVIPQ8NHG7 77 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 CLEC4DQ8WXI8 215 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 SRRTQ9BXP5 876 aaKnown RBP9.51□□□□□ -0.89
TCF4-241ENST00000568740 EXOC1Q9NV70 894 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 CLEC11AQ9Y240 323 aa9.51□□□□□ -0.89
TCF4-241ENST00000568740 IGLV3-22A0A075B6J6 115 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 RSPH10B2B2RC85 870 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 ICAM1P05362 532 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 RSPH10BP0C881 870 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 MAN1A1P33908 653 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 SPIRE1Q08AE8 756 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 FSTL1Q12841 308 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 PAK1Q13153 545 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 SEMA3FQ13275 785 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 BAATQ14032 418 aaPredicted RBP9.5□□□□□ -0.89
TCF4-241ENST00000568740 MAP1SQ66K74 1059 aaPredicted RBP9.5□□□□□ -0.89
TCF4-241ENST00000568740 APOBEC3FQ8IUX4 373 aaKnown RBP9.5□□□□□ -0.89
TCF4-241ENST00000568740 EPS8L1Q8TE68 723 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 RAD54LQ92698 747 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 AK8Q96MA6 479 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 C16orf45Q96MC5 204 aaPredicted RBP9.5□□□□□ -0.89
TCF4-241ENST00000568740 WRAP73Q9P2S5 460 aaPredicted RBP9.5□□□□□ -0.89
TCF4-241ENST00000568740 PPP1R9AQ9ULJ8 1098 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 MRPL11Q9Y3B7 192 aaKnown RBP9.5□□□□□ -0.89
TCF4-241ENST00000568740 SSC5DA1L4H1 1573 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 WDR46O15213 610 aaKnown RBP9.5□□□□□ -0.89
TCF4-241ENST00000568740 SPATA31C1P0DKV0 1188 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 VDRP11473 427 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 ZNF18P17022 549 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 AP3B2Q13367 1082 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 TMEM132BQ14DG7 1078 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 SPATA1Q5VX52 437 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 ANKRD40Q6AI12 368 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 FAM160B2Q86V87 743 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 KSR1Q8IVT5 923 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 TRIM47Q96LD4 638 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 GTPBP4Q9BZE4 634 aaKnown RBP9.5□□□□□ -0.89
TCF4-241ENST00000568740 BHMT2Q9H2M3 363 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 TMX1Q9H3N1 280 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 SLC38A10Q9HBR0 1119 aa9.5□□□□□ -0.89
TCF4-241ENST00000568740 DIS3Q9Y2L1 958 aaKnown RBP9.5□□□□□ -0.89
TCF4-241ENST00000568740 COL2A1P02458 1487 aaPredicted RBP9.49□□□□□ -0.89
TCF4-241ENST00000568740 ATP9AO75110 1047 aa9.49□□□□□ -0.89
TCF4-241ENST00000568740 KRT18P05783 430 aaKnown RBP9.49□□□□□ -0.89
TCF4-241ENST00000568740 PLA2G4BP0C869 781 aa9.49□□□□□ -0.89
TCF4-241ENST00000568740 RACK1P63244 317 aaKnown RBP9.49□□□□□ -0.89
TCF4-241ENST00000568740 MAPRE1Q15691 268 aaKnown RBP9.49□□□□□ -0.89
TCF4-241ENST00000568740 LRCH2Q5VUJ6 765 aa9.49□□□□□ -0.89
TCF4-241ENST00000568740 PPP4R4Q6NUP7 873 aa9.49□□□□□ -0.89
TCF4-241ENST00000568740 GADL1Q6ZQY3 521 aa9.49□□□□□ -0.89
TCF4-241ENST00000568740 GPBP1Q86WP2 473 aa9.49□□□□□ -0.89
TCF4-241ENST00000568740 TRIML1Q8N9V2 468 aa9.49□□□□□ -0.89
TCF4-241ENST00000568740 KIAA1524Q8TCG1 905 aa9.49□□□□□ -0.89
TCF4-241ENST00000568740 DYDC2Q96IM9 177 aa9.49□□□□□ -0.89
TCF4-241ENST00000568740 FRMD6Q96NE9 622 aa9.49□□□□□ -0.89
TCF4-241ENST00000568740 ZNF577Q9BSK1 485 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms