RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 PKN1Q16512 942 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 PFKFB3Q16875 520 aaPredicted RBP17.4■□□□□ 0.38
CDR2-206ENST00000567406 LEXMQ3ZCV2 418 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 IER5Q5VY09 327 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 MTHFD1LQ6UB35 978 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 ABHD15Q6UXT9 468 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 CCDC60Q8IWA6 550 aaPredicted RBP17.4■□□□□ 0.38
CDR2-206ENST00000567406 RASGRP4Q8TDF6 673 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 PHKBQ93100 1093 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 PPP1R16BQ96T49 567 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 CDHR5Q9HBB8 845 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 RC3H2Q9HBD1 1191 aaKnown RBP17.4■□□□□ 0.38
CDR2-206ENST00000567406 PADI3Q9ULW8 664 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 GINS2Q9Y248 185 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 ADGRA3Q8IWK6 1321 aa17.4■□□□□ 0.38
CDR2-206ENST00000567406 C5orf42Q9H799 3197 aa17.39■□□□□ 0.37
CDR2-206ENST00000567406 DHX15O43143 795 aaKnown RBP17.39■□□□□ 0.37
CDR2-206ENST00000567406 SCG2P13521 617 aa17.39■□□□□ 0.37
CDR2-206ENST00000567406 ATP4AP20648 1035 aa17.39■□□□□ 0.37
CDR2-206ENST00000567406 BMPR1AP36894 532 aa17.39■□□□□ 0.37
CDR2-206ENST00000567406 GATMP50440 423 aa17.39■□□□□ 0.37
CDR2-206ENST00000567406 AP3B2Q13367 1082 aa17.39■□□□□ 0.37
CDR2-206ENST00000567406 BTG3Q14201 252 aaPredicted RBP17.39■□□□□ 0.37
CDR2-206ENST00000567406 PAN2Q504Q3 1202 aaKnown RBP17.39■□□□□ 0.37
CDR2-206ENST00000567406 PTCRAQ6ISU1 281 aaPredicted RBP17.39■□□□□ 0.37
CDR2-206ENST00000567406 SWSAP1Q6NVH7 229 aa17.39■□□□□ 0.37
CDR2-206ENST00000567406 KCNB2Q92953 911 aa17.39■□□□□ 0.37
CDR2-206ENST00000567406 ZNF689Q96CS4 500 aaPredicted RBP17.39■□□□□ 0.37
CDR2-206ENST00000567406 CELF4Q9BZC1 486 aaKnown RBP17.39■□□□□ 0.37
CDR2-206ENST00000567406 ALG13Q9NP73 1137 aaKnown RBP17.39■□□□□ 0.37
CDR2-206ENST00000567406 ATG2AQ2TAZ0 1938 aa17.39■□□□□ 0.37
CDR2-206ENST00000567406 IGLV3-22A0A075B6J6 115 aa17.38■□□□□ 0.37
CDR2-206ENST00000567406 IGKV6D-21A0A0A0MT36 114 aa17.38■□□□□ 0.37
CDR2-206ENST00000567406 FAM86C2PA6NEL3 165 aa17.38■□□□□ 0.37
CDR2-206ENST00000567406 hCG_1984214I3L0E3 225 aa17.38■□□□□ 0.37
CDR2-206ENST00000567406 M0QZ92 97 aa17.38■□□□□ 0.37
CDR2-206ENST00000567406 DGKIO75912 1065 aa17.38■□□□□ 0.37
CDR2-206ENST00000567406 HMGB1P09429 215 aaKnown RBP17.38■□□□□ 0.37
CDR2-206ENST00000567406 GTF2F1P35269 517 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDR2-206ENST00000567406 TIGD5Q53EQ6 642 aa17.38■□□□□ 0.37
CDR2-206ENST00000567406 PDXDC2PQ6P474 469 aa17.38■□□□□ 0.37
CDR2-206ENST00000567406 ZNF713Q8N859 430 aaPredicted RBP17.38■□□□□ 0.37
CDR2-206ENST00000567406 TMX1Q9H3N1 280 aa17.38■□□□□ 0.37
CDR2-206ENST00000567406 NSUN3Q9H649 340 aaKnown RBP17.38■□□□□ 0.37
CDR2-206ENST00000567406 MRPL42Q9Y6G3 142 aaKnown RBP17.38■□□□□ 0.37
CDR2-206ENST00000567406 COL4A6Q14031 1691 aa17.38■□□□□ 0.37
CDR2-206ENST00000567406 EVPLQ92817 2033 aa17.38■□□□□ 0.37
CDR2-206ENST00000567406 IPO5O00410 1097 aaKnown RBP17.37■□□□□ 0.37
CDR2-206ENST00000567406 HSPA4P34932 840 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 CCT2P78371 535 aaKnown RBP17.37■□□□□ 0.37
CDR2-206ENST00000567406 KRT76Q01546 638 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 NFX1Q12986 1120 aaKnown RBP17.37■□□□□ 0.37
CDR2-206ENST00000567406 PAK2Q13177 524 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 BLOC1S2Q6QNY1 142 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 NIPA1Q7RTP0 329 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 NEK9Q8TD19 979 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 CRYGNQ8WXF5 182 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 CLP1Q92989 425 aaKnown RBP17.37■□□□□ 0.37
CDR2-206ENST00000567406 ZNF577Q9BSK1 485 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 C1QTNF1Q9BXJ1 281 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 GLT8D2Q9H1C3 349 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 IGFLR1Q9H665 355 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 ZNF302Q9NR11 478 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 CLDND1Q9NY35 253 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 IGSF9BQ9UPX0 1349 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 RALGAPA2Q2PPJ7 1873 aa17.37■□□□□ 0.37
CDR2-206ENST00000567406 SMIM35A0A1B0GVV1 85 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 GRXCR2A6NFK2 248 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 ZBTB42B2RXF5 422 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 C5orf67F2Z3F1 127 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 HBP1O60381 514 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 MGEA5O60502 916 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 CYP3A4P08684 503 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 RPS6KB1P23443 525 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 CLUL1Q15846 466 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 FAM160B1Q5W0V3 765 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 MIS18BP1Q6P0N0 1132 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 FAM178BQ8IXR5 827 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 CKAP2LQ8IYA6 745 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 KIAA0319LQ8IZA0 1049 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 CRIPAKQ8N1N5 446 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 ATP8B4Q8TF62 1192 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 TMEM40Q8WWA1 233 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
CDR2-206ENST00000567406 LARP6Q9BRS8 491 aaKnown RBP17.36■□□□□ 0.37
CDR2-206ENST00000567406 LRFN3Q9BTN0 628 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 C11orf84Q9BUA3 381 aaPredicted RBP17.36■□□□□ 0.37
CDR2-206ENST00000567406 SLC26A6Q9BXS9 759 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 ZMYND12Q9H0C1 365 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 NCOA5Q9HCD5 579 aaKnown RBP17.36■□□□□ 0.37
CDR2-206ENST00000567406 C6orf50Q9HD87 102 aa17.36■□□□□ 0.37
CDR2-206ENST00000567406 NOC2LQ9Y3T9 749 aaKnown RBP17.36■□□□□ 0.37
CDR2-206ENST00000567406 CCDC196A0A1B0GTZ2 297 aa17.35■□□□□ 0.37
CDR2-206ENST00000567406 PRPF3O43395 683 aaKnown RBP17.35■□□□□ 0.37
CDR2-206ENST00000567406 EDIL3O43854 480 aa17.35■□□□□ 0.37
CDR2-206ENST00000567406 RB1P06400 928 aa17.35■□□□□ 0.37
CDR2-206ENST00000567406 DNAJB1P25685 340 aa17.35■□□□□ 0.37
CDR2-206ENST00000567406 SSTR3P32745 418 aaPredicted RBP17.35■□□□□ 0.37
CDR2-206ENST00000567406 RCAN1P53805 252 aa17.35■□□□□ 0.37
CDR2-206ENST00000567406 DLX2Q07687 328 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms