RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 MTUS1Q9ULD2 1270 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 TRPC6Q9Y210 931 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 CDY2AQ9Y6F7 541 aa16.2■□□□□ 0.18
COMMD4-216ENST00000567023 COL4A4P53420 1690 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-216ENST00000567023 SMIM35A0A1B0GVV1 85 aa16.19■□□□□ 0.18
COMMD4-216ENST00000567023 TNFRSF10AO00220 468 aa16.19■□□□□ 0.18
COMMD4-216ENST00000567023 ENPP3O14638 875 aa16.19■□□□□ 0.18
COMMD4-216ENST00000567023 HBP1O60381 514 aa16.19■□□□□ 0.18
COMMD4-216ENST00000567023 UPP2O95045 317 aa16.19■□□□□ 0.18
COMMD4-216ENST00000567023 EPC2Q52LR7 807 aa16.19■□□□□ 0.18
COMMD4-216ENST00000567023 FAM43BQ6ZT52 329 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-216ENST00000567023 CCDC148Q8NFR7 591 aa16.19■□□□□ 0.18
COMMD4-216ENST00000567023 ADAMTS19Q8TE59 1207 aa16.19■□□□□ 0.18
COMMD4-216ENST00000567023 ZBTB10Q96DT7 871 aa16.19■□□□□ 0.18
COMMD4-216ENST00000567023 ZNF274Q96GC6 653 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-216ENST00000567023 SLC26A6Q9BXS9 759 aa16.19■□□□□ 0.18
COMMD4-216ENST00000567023 AGO3Q9H9G7 860 aaKnown RBP16.19■□□□□ 0.18
COMMD4-216ENST00000567023 KDM3AQ9Y4C1 1321 aa16.19■□□□□ 0.18
COMMD4-216ENST00000567023 CCT2P78371 535 aaKnown RBP16.18■□□□□ 0.18
COMMD4-216ENST00000567023 FAM160B1Q5W0V3 765 aa16.18■□□□□ 0.18
COMMD4-216ENST00000567023 ZNF746Q6NUN9 644 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-216ENST00000567023 MIS18BP1Q6P0N0 1132 aa16.18■□□□□ 0.18
COMMD4-216ENST00000567023 MTHFD1LQ6UB35 978 aa16.18■□□□□ 0.18
COMMD4-216ENST00000567023 CCDC60Q8IWA6 550 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-216ENST00000567023 SMAP1Q8IYB5 467 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-216ENST00000567023 FBXO22Q8NEZ5 403 aa16.18■□□□□ 0.18
COMMD4-216ENST00000567023 ATP8B4Q8TF62 1192 aa16.18■□□□□ 0.18
COMMD4-216ENST00000567023 HLA-CQ95604 372 aa16.18■□□□□ 0.18
COMMD4-216ENST00000567023 IL17RAQ96F46 866 aa16.18■□□□□ 0.18
COMMD4-216ENST00000567023 ZNF577Q9BSK1 485 aa16.18■□□□□ 0.18
COMMD4-216ENST00000567023 FTHL17Q9BXU8 183 aa16.18■□□□□ 0.18
COMMD4-216ENST00000567023 FAM49AQ9H0Q0 323 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-216ENST00000567023 RC3H2Q9HBD1 1191 aaKnown RBP16.18■□□□□ 0.18
COMMD4-216ENST00000567023 MAFBQ9Y5Q3 323 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-216ENST00000567023 CYP46A1Q9Y6A2 500 aa16.18■□□□□ 0.18
COMMD4-216ENST00000567023 IGSF9BQ9UPX0 1349 aa16.18■□□□□ 0.18
COMMD4-216ENST00000567023 COL1A2P08123 1366 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 H3BNC9 293 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 M0QZ92 97 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 DDX39AO00148 427 aaKnown RBP16.17■□□□□ 0.18
COMMD4-216ENST00000567023 BACH1O14867 736 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 EDIL3O43854 480 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 ATP4AP20648 1035 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 KLRC1P26715 233 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 USP11P51784 963 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 SWSAP1Q6NVH7 229 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 PDXDC2PQ6P474 469 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 CRIPAKQ8N1N5 446 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 IL27Q8NEV9 243 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 TRAPPC12Q8WVT3 735 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 LENG9Q96B70 501 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 ZNF689Q96CS4 500 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-216ENST00000567023 UHRF1Q96T88 793 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-216ENST00000567023 CELF4Q9BZC1 486 aaKnown RBP16.17■□□□□ 0.18
COMMD4-216ENST00000567023 NCOA5Q9HCD5 579 aaKnown RBP16.17■□□□□ 0.18
COMMD4-216ENST00000567023 ZNF302Q9NR11 478 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 VPS54Q9P1Q0 977 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 TRPV2Q9Y5S1 764 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 TTC3P53804 2025 aa16.17■□□□□ 0.18
COMMD4-216ENST00000567023 NCOR1O75376 2440 aa16.16■□□□□ 0.18
COMMD4-216ENST00000567023 ZBTB42B2RXF5 422 aa16.16■□□□□ 0.18
COMMD4-216ENST00000567023 LINC00271P0C7V0 271 aa16.16■□□□□ 0.18
COMMD4-216ENST00000567023 KRT76Q01546 638 aa16.16■□□□□ 0.18
COMMD4-216ENST00000567023 PRR16Q569H4 304 aa16.16■□□□□ 0.18
COMMD4-216ENST00000567023 ZNF484Q5JVG2 852 aa16.16■□□□□ 0.18
COMMD4-216ENST00000567023 TMEM192Q8IY95 271 aa16.16■□□□□ 0.18
COMMD4-216ENST00000567023 FAM177A1Q8N128 213 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-216ENST00000567023 RASGRP4Q8TDF6 673 aa16.16■□□□□ 0.18
COMMD4-216ENST00000567023 MRPL38Q96DV4 380 aaKnown RBP16.16■□□□□ 0.18
COMMD4-216ENST00000567023 PADI3Q9ULW8 664 aa16.16■□□□□ 0.18
COMMD4-216ENST00000567023 PCDHA10Q9Y5I2 948 aa16.16■□□□□ 0.18
COMMD4-216ENST00000567023 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-216ENST00000567023 C5orf67F2Z3F1 127 aa16.15■□□□□ 0.18
COMMD4-216ENST00000567023 PPFIA3O75145 1194 aa16.15■□□□□ 0.18
COMMD4-216ENST00000567023 DGKIO75912 1065 aa16.15■□□□□ 0.18
COMMD4-216ENST00000567023 CD52P31358 61 aa16.15■□□□□ 0.18
COMMD4-216ENST00000567023 KCNQ1P51787 676 aa16.15■□□□□ 0.18
COMMD4-216ENST00000567023 PTPROQ16827 1216 aa16.15■□□□□ 0.18
COMMD4-216ENST00000567023 RTN4RL1Q86UN2 441 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-216ENST00000567023 TRIM22Q8IYM9 498 aa16.15■□□□□ 0.18
COMMD4-216ENST00000567023 KIAA0319LQ8IZA0 1049 aa16.15■□□□□ 0.18
COMMD4-216ENST00000567023 FIBCD1Q8N539 461 aa16.15■□□□□ 0.18
COMMD4-216ENST00000567023 LINC01599Q8WXQ3 324 aa16.15■□□□□ 0.18
COMMD4-216ENST00000567023 BBXQ8WY36 941 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-216ENST00000567023 CLP1Q92989 425 aaKnown RBP16.15■□□□□ 0.18
COMMD4-216ENST00000567023 BDP1A6H8Y1 2624 aa16.14■□□□□ 0.17
COMMD4-216ENST00000567023 M0R2N6 131 aa16.14■□□□□ 0.17
COMMD4-216ENST00000567023 DEXIO95424 95 aa16.14■□□□□ 0.17
COMMD4-216ENST00000567023 RB1P06400 928 aa16.14■□□□□ 0.17
COMMD4-216ENST00000567023 PSAPP07602 524 aa16.14■□□□□ 0.17
COMMD4-216ENST00000567023 NLRP5P59047 1200 aa16.14■□□□□ 0.17
COMMD4-216ENST00000567023 SSRP1Q08945 709 aaKnown RBP16.14■□□□□ 0.17
COMMD4-216ENST00000567023 TMEM62Q0P6H9 643 aa16.14■□□□□ 0.17
COMMD4-216ENST00000567023 RIT2Q99578 217 aa16.14■□□□□ 0.17
COMMD4-216ENST00000567023 C22orf23Q9BZE7 217 aa16.14■□□□□ 0.17
COMMD4-216ENST00000567023 UPF3BQ9BZI7 483 aaKnown RBP16.14■□□□□ 0.17
COMMD4-216ENST00000567023 PCDHA4Q9UN74 947 aa16.14■□□□□ 0.17
COMMD4-216ENST00000567023 RWDD3Q9Y3V2 267 aa16.14■□□□□ 0.17
COMMD4-216ENST00000567023 ADGRA3Q8IWK6 1321 aa16.14■□□□□ 0.17
COMMD4-216ENST00000567023 CYP3A7-CYP3A51PA0A087WV96 503 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms