RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 TMEM260Q9NX78 707 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 PCDHA2Q9Y5H9 948 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 TRPV2Q9Y5S1 764 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 SQORQ9Y6N5 450 aa13.6□□□□□ -0.23
UBR1-206ENST00000566493 POTEB3A0JP26 581 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 DDX39AO00148 427 aaKnown RBP13.59□□□□□ -0.23
UBR1-206ENST00000566493 BACH1O14867 736 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 RB1P06400 928 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 KCNA5P22460 613 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 CDC27P30260 824 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 TMEM62Q0P6H9 643 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 ITGB3BPQ13352 177 aaPredicted RBP13.59□□□□□ -0.23
UBR1-206ENST00000566493 BTG3Q14201 252 aaPredicted RBP13.59□□□□□ -0.23
UBR1-206ENST00000566493 PFKFB3Q16875 520 aaPredicted RBP13.59□□□□□ -0.23
UBR1-206ENST00000566493 LEXMQ3ZCV2 418 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 JAKMIP3Q5VZ66 844 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 FAM160B1Q5W0V3 765 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 MCTP2Q6DN12 878 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 POTEBQ6S5H4 581 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 Q6ZUG5 572 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 NIPA1Q7RTP0 329 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 NME8Q8N427 588 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 FTHL17Q9BXU8 183 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 C6orf50Q9HD87 102 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 ADGRA3Q8IWK6 1321 aa13.59□□□□□ -0.23
UBR1-206ENST00000566493 SMIM35A0A1B0GVV1 85 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 ATG7O95352 703 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 PYGBP11216 843 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 SCG2P13521 617 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 CD52P31358 61 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 ADD1P35611 737 aaKnown RBP13.58□□□□□ -0.24
UBR1-206ENST00000566493 BMPR1AP36894 532 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 CLK2P49760 499 aaKnown RBP13.58□□□□□ -0.24
UBR1-206ENST00000566493 AKAP17AQ02040 695 aaKnown RBP13.58□□□□□ -0.24
UBR1-206ENST00000566493 APOBRQ0VD83 1088 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 PAK2Q13177 524 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 PUS10Q3MIT2 529 aaKnown RBP13.58□□□□□ -0.24
UBR1-206ENST00000566493 BLOC1S2Q6QNY1 142 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 EP400NLQ6ZTU2 488 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 PLA2G4DQ86XP0 818 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 TRAPPC12Q8WVT3 735 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 ZBTB10Q96DT7 871 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 JAKMIP1Q96N16 626 aaKnown RBP13.58□□□□□ -0.24
UBR1-206ENST00000566493 C11orf84Q9BUA3 381 aaPredicted RBP13.58□□□□□ -0.24
UBR1-206ENST00000566493 CELF4Q9BZC1 486 aaKnown RBP13.58□□□□□ -0.24
UBR1-206ENST00000566493 NSUN3Q9H649 340 aaKnown RBP13.58□□□□□ -0.24
UBR1-206ENST00000566493 FAM217BQ9NTX9 383 aaPredicted RBP13.58□□□□□ -0.24
UBR1-206ENST00000566493 TCEAL9Q9UHQ7 104 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 PCDHB13Q9Y5F0 798 aa13.58□□□□□ -0.24
UBR1-206ENST00000566493 LOXHD1Q8IVV2 1947 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 HBP1O60381 514 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 STAG3L1P0CL83 205 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 CPA1P15085 419 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 GNA11P29992 359 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 KRT76Q01546 638 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 TCEAL5Q5H9L2 206 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 PTCRAQ6ISU1 281 aaPredicted RBP13.57□□□□□ -0.24
UBR1-206ENST00000566493 MIS18BP1Q6P0N0 1132 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 MTHFD1LQ6UB35 978 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 BRF1Q92994 677 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 LMAN2LQ9H0V9 348 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 AGO3Q9H9G7 860 aaKnown RBP13.57□□□□□ -0.24
UBR1-206ENST00000566493 ZNF302Q9NR11 478 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 PADI3Q9ULW8 664 aa13.57□□□□□ -0.24
UBR1-206ENST00000566493 TTC3P53804 2025 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 IGKV6D-21A0A0A0MT36 114 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 ESYT2A0FGR8 921 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 FAM86B1E9PN63 330 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 C5orf67F2Z3F1 127 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 IPO5O00410 1097 aaKnown RBP13.56□□□□□ -0.24
UBR1-206ENST00000566493 PRPF3O43395 683 aaKnown RBP13.56□□□□□ -0.24
UBR1-206ENST00000566493 NCK2O43639 380 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 DGKIO75912 1065 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 CCNE2O96020 404 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 CYP3A4P08684 503 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 FAM86B2P0C5J1 330 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 KLRC1P26715 233 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 SETQ01105 290 aaPredicted RBP13.56□□□□□ -0.24
UBR1-206ENST00000566493 ZNF484Q5JVG2 852 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 PDXDC2PQ6P474 469 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 ABHD15Q6UXT9 468 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 NPAS4Q8IUM7 802 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 CKAP2LQ8IYA6 745 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 REXO1Q8N1G1 1221 aaKnown RBP13.56□□□□□ -0.24
UBR1-206ENST00000566493 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.56□□□□□ -0.24
UBR1-206ENST00000566493 BICD2Q8TD16 824 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 ATP8B4Q8TF62 1192 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 SPOCK2Q92563 424 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 KCNB2Q92953 911 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 PABPC5Q96DU9 382 aaKnown RBP13.56□□□□□ -0.24
UBR1-206ENST00000566493 ZNF577Q9BSK1 485 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 ZMYND12Q9H0C1 365 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 TBC1D22BQ9NU19 505 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 LRFN2Q9ULH4 789 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 FAM50BQ9Y247 325 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 IGSF9BQ9UPX0 1349 aa13.56□□□□□ -0.24
UBR1-206ENST00000566493 PSMA5P28066 241 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 SSTR3P32745 418 aaPredicted RBP13.55□□□□□ -0.24
UBR1-206ENST00000566493 HSPA4P34932 840 aa13.55□□□□□ -0.24
UBR1-206ENST00000566493 NFX1Q12986 1120 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms