RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 SMIM35A0A1B0GVV1 85 aa17.79■□□□□ 0.44
CDH3-204ENST00000565453 UPP2O95045 317 aa17.79■□□□□ 0.44
CDH3-204ENST00000565453 ATP4AP20648 1035 aa17.79■□□□□ 0.44
CDH3-204ENST00000565453 MTHFD1LQ6UB35 978 aa17.79■□□□□ 0.44
CDH3-204ENST00000565453 TSHZ1Q6ZSZ6 1077 aa17.79■□□□□ 0.44
CDH3-204ENST00000565453 ATP8B4Q8TF62 1192 aa17.79■□□□□ 0.44
CDH3-204ENST00000565453 LARP6Q9BRS8 491 aaKnown RBP17.79■□□□□ 0.44
CDH3-204ENST00000565453 ZNF577Q9BSK1 485 aa17.79■□□□□ 0.44
CDH3-204ENST00000565453 TSPYL2Q9H2G4 693 aaPredicted RBP17.79■□□□□ 0.44
CDH3-204ENST00000565453 AGO3Q9H9G7 860 aaKnown RBP17.79■□□□□ 0.44
CDH3-204ENST00000565453 TBC1D22BQ9NU19 505 aa17.79■□□□□ 0.44
CDH3-204ENST00000565453 PPP4R2Q9NY27 417 aa17.79■□□□□ 0.44
CDH3-204ENST00000565453 SQORQ9Y6N5 450 aa17.79■□□□□ 0.44
CDH3-204ENST00000565453 TRANK1O15050 2925 aa17.78■□□□□ 0.44
CDH3-204ENST00000565453 ZBTB42B2RXF5 422 aa17.78■□□□□ 0.44
CDH3-204ENST00000565453 ENPP3O14638 875 aa17.78■□□□□ 0.44
CDH3-204ENST00000565453 HBP1O60381 514 aa17.78■□□□□ 0.44
CDH3-204ENST00000565453 SSRP1Q08945 709 aaKnown RBP17.78■□□□□ 0.44
CDH3-204ENST00000565453 PRR16Q569H4 304 aa17.78■□□□□ 0.44
CDH3-204ENST00000565453 FAM160B1Q5W0V3 765 aa17.78■□□□□ 0.44
CDH3-204ENST00000565453 ZNF746Q6NUN9 644 aaPredicted RBP17.78■□□□□ 0.44
CDH3-204ENST00000565453 MIS18BP1Q6P0N0 1132 aa17.78■□□□□ 0.44
CDH3-204ENST00000565453 LINC01599Q8WXQ3 324 aa17.78■□□□□ 0.44
CDH3-204ENST00000565453 YME1L1Q96TA2 773 aa17.78■□□□□ 0.44
CDH3-204ENST00000565453 RC3H2Q9HBD1 1191 aaKnown RBP17.78■□□□□ 0.44
CDH3-204ENST00000565453 ZNF302Q9NR11 478 aa17.78■□□□□ 0.44
CDH3-204ENST00000565453 TRPV2Q9Y5S1 764 aa17.78■□□□□ 0.44
CDH3-204ENST00000565453 COL1A2P08123 1366 aa17.78■□□□□ 0.44
CDH3-204ENST00000565453 KDM3AQ9Y4C1 1321 aa17.77■□□□□ 0.44
CDH3-204ENST00000565453 BACH1O14867 736 aa17.77■□□□□ 0.44
CDH3-204ENST00000565453 CD52P31358 61 aa17.77■□□□□ 0.44
CDH3-204ENST00000565453 TFF2Q03403 129 aa17.77■□□□□ 0.44
CDH3-204ENST00000565453 NPY5RQ15761 445 aa17.77■□□□□ 0.44
CDH3-204ENST00000565453 IER5Q5VY09 327 aa17.77■□□□□ 0.44
CDH3-204ENST00000565453 SWSAP1Q6NVH7 229 aa17.77■□□□□ 0.44
CDH3-204ENST00000565453 PDXDC2PQ6P474 469 aa17.77■□□□□ 0.44
CDH3-204ENST00000565453 SMAP1Q8IYB5 467 aaPredicted RBP17.77■□□□□ 0.44
CDH3-204ENST00000565453 TRIM22Q8IYM9 498 aa17.77■□□□□ 0.44
CDH3-204ENST00000565453 FBXO22Q8NEZ5 403 aa17.77■□□□□ 0.44
CDH3-204ENST00000565453 SAMD11Q96NU1 681 aa17.77■□□□□ 0.44
CDH3-204ENST00000565453 PDRG1Q9NUG6 133 aa17.77■□□□□ 0.44
CDH3-204ENST00000565453 MAFBQ9Y5Q3 323 aaPredicted RBP17.77■□□□□ 0.44
CDH3-204ENST00000565453 VCANP13611 3396 aa17.77■□□□□ 0.43
CDH3-204ENST00000565453 IGSF9BQ9UPX0 1349 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 M0R2N6 131 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 DEXIO95424 95 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 KLRC1P26715 233 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 USP11P51784 963 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 NLRP5P59047 1200 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 KRT76Q01546 638 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 TMEM62Q0P6H9 643 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 SKIV2LQ15477 1246 aaKnown RBP17.76■□□□□ 0.43
CDH3-204ENST00000565453 EPC2Q52LR7 807 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 ZNF484Q5JVG2 852 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 ERICH6BQ5W0A0 696 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 RTN4RL1Q86UN2 441 aaPredicted RBP17.76■□□□□ 0.43
CDH3-204ENST00000565453 NME8Q8N427 588 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 DAGLBQ8NCG7 672 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 CELF4Q9BZC1 486 aaKnown RBP17.76■□□□□ 0.43
CDH3-204ENST00000565453 PCDHA4Q9UN74 947 aa17.76■□□□□ 0.43
CDH3-204ENST00000565453 MSH4O15457 936 aa17.75■□□□□ 0.43
CDH3-204ENST00000565453 LINC00271P0C7V0 271 aa17.75■□□□□ 0.43
CDH3-204ENST00000565453 BMP1P13497 986 aa17.75■□□□□ 0.43
CDH3-204ENST00000565453 STK3Q13188 491 aa17.75■□□□□ 0.43
CDH3-204ENST00000565453 KIAA0319LQ8IZA0 1049 aa17.75■□□□□ 0.43
CDH3-204ENST00000565453 CRIPAKQ8N1N5 446 aa17.75■□□□□ 0.43
CDH3-204ENST00000565453 ADAMTS19Q8TE59 1207 aa17.75■□□□□ 0.43
CDH3-204ENST00000565453 BBXQ8WY36 941 aaPredicted RBP17.75■□□□□ 0.43
CDH3-204ENST00000565453 ZNF689Q96CS4 500 aaPredicted RBP17.75■□□□□ 0.43
CDH3-204ENST00000565453 IL17RAQ96F46 866 aa17.75■□□□□ 0.43
CDH3-204ENST00000565453 AIFM3Q96NN9 605 aa17.75■□□□□ 0.43
CDH3-204ENST00000565453 PADI3Q9ULW8 664 aa17.75■□□□□ 0.43
CDH3-204ENST00000565453 COG5Q9UP83 839 aa17.75■□□□□ 0.43
CDH3-204ENST00000565453 PCDHA10Q9Y5I2 948 aa17.75■□□□□ 0.43
CDH3-204ENST00000565453 TTC3P53804 2025 aa17.74■□□□□ 0.43
CDH3-204ENST00000565453 M0QZ92 97 aa17.74■□□□□ 0.43
CDH3-204ENST00000565453 CPLX1O14810 134 aa17.74■□□□□ 0.43
CDH3-204ENST00000565453 C22orf31O95567 290 aa17.74■□□□□ 0.43
CDH3-204ENST00000565453 PSAPP07602 524 aa17.74■□□□□ 0.43
CDH3-204ENST00000565453 SCRN1Q12765 414 aa17.74■□□□□ 0.43
CDH3-204ENST00000565453 TMEM192Q8IY95 271 aa17.74■□□□□ 0.43
CDH3-204ENST00000565453 BLIDQ8IZY5 108 aa17.74■□□□□ 0.43
CDH3-204ENST00000565453 FAM177A1Q8N128 213 aaPredicted RBP17.74■□□□□ 0.43
CDH3-204ENST00000565453 TBCKQ8TEA7 893 aa17.74■□□□□ 0.43
CDH3-204ENST00000565453 SLC5A5Q92911 643 aa17.74■□□□□ 0.43
CDH3-204ENST00000565453 GABBR1Q9UBS5 961 aa17.74■□□□□ 0.43
CDH3-204ENST00000565453 RALGAPA2Q2PPJ7 1873 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 NLRC5Q86WI3 1866 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 CYP3A7-CYP3A51PA0A087WV96 503 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 H3BNC9 293 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 CYP3A7P24462 503 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 KCNQ1P51787 676 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 AAK1Q2M2I8 961 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 CPLX2Q6PUV4 134 aaKnown RBP17.73■□□□□ 0.43
CDH3-204ENST00000565453 FIBCD1Q8N539 461 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 MBOAT7Q96N66 472 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 RIT2Q99578 217 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 FTHL17Q9BXU8 183 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 C22orf23Q9BZE7 217 aa17.73■□□□□ 0.43
CDH3-204ENST00000565453 TMX1Q9H3N1 280 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms