RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 CDY2AQ9Y6F7 541 aa17.06■□□□□ 0.32
SPG7-210ENST00000564409 COL1A2P08123 1366 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 KDM3AQ9Y4C1 1321 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 EVPLQ92817 2033 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 SMIM35A0A1B0GVV1 85 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 FAM86B1E9PN63 330 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 HBP1O60381 514 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 UPP2O95045 317 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 FAM86B2P0C5J1 330 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 NTRK3Q16288 839 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 KRT40Q6A162 431 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 MIS18BP1Q6P0N0 1132 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 RUFY3Q7L099 469 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 SMAP1Q8IYB5 467 aaPredicted RBP17.05■□□□□ 0.32
SPG7-210ENST00000564409 MRPL38Q96DV4 380 aaKnown RBP17.05■□□□□ 0.32
SPG7-210ENST00000564409 IL17RAQ96F46 866 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 OSBPL7Q9BZF2 842 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 TCEAL9Q9UHQ7 104 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 WDR81Q562E7 1941 aa17.05■□□□□ 0.32
SPG7-210ENST00000564409 H3BNC9 293 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 ENPP3O14638 875 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 BACH1O14867 736 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 DHX15O43143 795 aaKnown RBP17.04■□□□□ 0.32
SPG7-210ENST00000564409 PDIA3P30101 505 aaKnown RBP17.04■□□□□ 0.32
SPG7-210ENST00000564409 CIITAP33076 1130 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 EPC2Q52LR7 807 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 ZNF484Q5JVG2 852 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 ZNF746Q6NUN9 644 aaPredicted RBP17.04■□□□□ 0.32
SPG7-210ENST00000564409 TRIM22Q8IYM9 498 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 ATP8B4Q8TF62 1192 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 C17orf80Q9BSJ5 609 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 ZNF577Q9BSK1 485 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 TM6SF1Q9BZW5 370 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 ZSWIM6Q9HCJ5 1215 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 RNF216Q9NWF9 866 aaPredicted RBP17.04■□□□□ 0.32
SPG7-210ENST00000564409 TRPV2Q9Y5S1 764 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
SPG7-210ENST00000564409 IGSF9BQ9UPX0 1349 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 CCNE2O96020 404 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 RB1P06400 928 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 NEFLP07196 543 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 USP11P51784 963 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 KRT76Q01546 638 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 TFF2Q03403 129 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 ODR4Q5SWX8 454 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 PDXDC2PQ6P474 469 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 MTHFD1LQ6UB35 978 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 TMEM192Q8IY95 271 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 FIBCD1Q8N539 461 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 ZNF274Q96GC6 653 aaPredicted RBP17.03■□□□□ 0.32
SPG7-210ENST00000564409 CELF4Q9BZC1 486 aaKnown RBP17.03■□□□□ 0.32
SPG7-210ENST00000564409 C22orf23Q9BZE7 217 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 FAM49AQ9H0Q0 323 aaPredicted RBP17.03■□□□□ 0.32
SPG7-210ENST00000564409 ZNF302Q9NR11 478 aa17.03■□□□□ 0.32
SPG7-210ENST00000564409 C5orf67F2Z3F1 127 aa17.02■□□□□ 0.32
SPG7-210ENST00000564409 TIGD5Q53EQ6 642 aa17.02■□□□□ 0.32
SPG7-210ENST00000564409 ZNF710Q8N1W2 664 aa17.02■□□□□ 0.32
SPG7-210ENST00000564409 BBXQ8WY36 941 aaPredicted RBP17.02■□□□□ 0.32
SPG7-210ENST00000564409 PHKBQ93100 1093 aa17.02■□□□□ 0.32
SPG7-210ENST00000564409 SLC26A6Q9BXS9 759 aa17.02■□□□□ 0.32
SPG7-210ENST00000564409 PCDHA10Q9Y5I2 948 aa17.02■□□□□ 0.32
SPG7-210ENST00000564409 ADGRA3Q8IWK6 1321 aa17.01■□□□□ 0.31
SPG7-210ENST00000564409 MUC3AQ02505 3323 aa17.01■□□□□ 0.31
SPG7-210ENST00000564409 PSAPP07602 524 aa17.01■□□□□ 0.31
SPG7-210ENST00000564409 KLRC1P26715 233 aa17.01■□□□□ 0.31
SPG7-210ENST00000564409 GPM6BQ13491 265 aa17.01■□□□□ 0.31
SPG7-210ENST00000564409 SWSAP1Q6NVH7 229 aa17.01■□□□□ 0.31
SPG7-210ENST00000564409 CPLX2Q6PUV4 134 aaKnown RBP17.01■□□□□ 0.31
SPG7-210ENST00000564409 CCDC60Q8IWA6 550 aaPredicted RBP17.01■□□□□ 0.31
SPG7-210ENST00000564409 CLP1Q92989 425 aaKnown RBP17.01■□□□□ 0.31
SPG7-210ENST00000564409 FAM167AQ96KS9 214 aa17.01■□□□□ 0.31
SPG7-210ENST00000564409 C11orf84Q9BUA3 381 aaPredicted RBP17.01■□□□□ 0.31
SPG7-210ENST00000564409 AGO3Q9H9G7 860 aaKnown RBP17.01■□□□□ 0.31
SPG7-210ENST00000564409 CEP131Q9UPN4 1083 aa17.01■□□□□ 0.31
SPG7-210ENST00000564409 MAFBQ9Y5Q3 323 aaPredicted RBP17.01■□□□□ 0.31
SPG7-210ENST00000564409 REV3LO60673 3130 aa17.01■□□□□ 0.31
SPG7-210ENST00000564409 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17■□□□□ 0.31
SPG7-210ENST00000564409 DDX39AO00148 427 aaKnown RBP17■□□□□ 0.31
SPG7-210ENST00000564409 CPLX1O14810 134 aa17■□□□□ 0.31
SPG7-210ENST00000564409 NCK2O43639 380 aa17■□□□□ 0.31
SPG7-210ENST00000564409 STAG3L1P0CL83 205 aa17■□□□□ 0.31
SPG7-210ENST00000564409 CD52P31358 61 aa17■□□□□ 0.31
SPG7-210ENST00000564409 BMPR1AP36894 532 aa17■□□□□ 0.31
SPG7-210ENST00000564409 KCNQ1P51787 676 aa17■□□□□ 0.31
SPG7-210ENST00000564409 SSRP1Q08945 709 aaKnown RBP17■□□□□ 0.31
SPG7-210ENST00000564409 PAK2Q13177 524 aa17■□□□□ 0.31
SPG7-210ENST00000564409 TOB2Q14106 344 aaPredicted RBP17■□□□□ 0.31
SPG7-210ENST00000564409 PRR16Q569H4 304 aa17■□□□□ 0.31
SPG7-210ENST00000564409 GALNT17Q6IS24 598 aa17■□□□□ 0.31
SPG7-210ENST00000564409 NPAS4Q8IUM7 802 aa17■□□□□ 0.31
SPG7-210ENST00000564409 TRAPPC12Q8WVT3 735 aa17■□□□□ 0.31
SPG7-210ENST00000564409 ZNF689Q96CS4 500 aaPredicted RBP17■□□□□ 0.31
SPG7-210ENST00000564409 RIT2Q99578 217 aa17■□□□□ 0.31
SPG7-210ENST00000564409 PLVAPQ9BX97 442 aa17■□□□□ 0.31
SPG7-210ENST00000564409 LMAN2LQ9H0V9 348 aa17■□□□□ 0.31
SPG7-210ENST00000564409 UBE2ZQ9H832 354 aaPredicted RBP17■□□□□ 0.31
SPG7-210ENST00000564409 RC3H2Q9HBD1 1191 aaKnown RBP17■□□□□ 0.31
SPG7-210ENST00000564409 PADI3Q9ULW8 664 aa17■□□□□ 0.31
SPG7-210ENST00000564409 DGKIO75912 1065 aa16.99■□□□□ 0.31
SPG7-210ENST00000564409 DEXIO95424 95 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms