RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 MTHFD1LQ6UB35 978 aa18.68■□□□□ 0.58
AC004449.1-201ENST00000564240 Q6ZUG5 572 aa18.68■□□□□ 0.58
AC004449.1-201ENST00000564240 TRMT1LQ7Z2T5 733 aaKnown RBP18.68■□□□□ 0.58
AC004449.1-201ENST00000564240 NME8Q8N427 588 aa18.68■□□□□ 0.58
AC004449.1-201ENST00000564240 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.68■□□□□ 0.58
AC004449.1-201ENST00000564240 JAKMIP1Q96N16 626 aaKnown RBP18.68■□□□□ 0.58
AC004449.1-201ENST00000564240 FTHL17Q9BXU8 183 aa18.68■□□□□ 0.58
AC004449.1-201ENST00000564240 CELF4Q9BZC1 486 aaKnown RBP18.68■□□□□ 0.58
AC004449.1-201ENST00000564240 AGO3Q9H9G7 860 aaKnown RBP18.68■□□□□ 0.58
AC004449.1-201ENST00000564240 C6orf50Q9HD87 102 aa18.68■□□□□ 0.58
AC004449.1-201ENST00000564240 CLDND1Q9NY35 253 aa18.68■□□□□ 0.58
AC004449.1-201ENST00000564240 ADGRA3Q8IWK6 1321 aa18.68■□□□□ 0.58
AC004449.1-201ENST00000564240 HBP1O60381 514 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 SCG2P13521 617 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 SLC26A2P50443 739 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 KRT76Q01546 638 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 SWSAP1Q6NVH7 229 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 MIS18BP1Q6P0N0 1132 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 PDXDC2PQ6P474 469 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 BLOC1S2Q6QNY1 142 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 CCDC12Q8WUD4 166 aaPredicted RBP18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 BRF1Q92994 677 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 IGFLR1Q9H665 355 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 ZNF302Q9NR11 478 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 FAM217BQ9NTX9 383 aaPredicted RBP18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 PADI3Q9ULW8 664 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 FAM50BQ9Y247 325 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 SQORQ9Y6N5 450 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 TRANK1O15050 2925 aa18.67■□□□□ 0.58
AC004449.1-201ENST00000564240 SMIM35A0A1B0GVV1 85 aa18.66■□□□□ 0.58
AC004449.1-201ENST00000564240 IL9P15248 144 aa18.66■□□□□ 0.58
AC004449.1-201ENST00000564240 PFKFB3Q16875 520 aaPredicted RBP18.66■□□□□ 0.58
AC004449.1-201ENST00000564240 PAN2Q504Q3 1202 aaKnown RBP18.66■□□□□ 0.58
AC004449.1-201ENST00000564240 TMEM31Q5JXX7 168 aa18.66■□□□□ 0.58
AC004449.1-201ENST00000564240 NIPA1Q7RTP0 329 aa18.66■□□□□ 0.58
AC004449.1-201ENST00000564240 GJD3Q8N144 294 aa18.66■□□□□ 0.58
AC004449.1-201ENST00000564240 ZNF577Q9BSK1 485 aa18.66■□□□□ 0.58
AC004449.1-201ENST00000564240 SPTBN5Q9NRC6 3674 aaKnown RBP18.66■□□□□ 0.58
AC004449.1-201ENST00000564240 BDP1A6H8Y1 2624 aa18.66■□□□□ 0.58
AC004449.1-201ENST00000564240 GRM6O15303 877 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 NCK2O43639 380 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 DGKIO75912 1065 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 ATG7O95352 703 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 GNA11P29992 359 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 RCAN1P53805 252 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 TMEM266Q2M3C6 531 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 ZNF484Q5JVG2 852 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 SPOUT1Q5T280 376 aaKnown RBP18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 MCTP2Q6DN12 878 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 ABHD15Q6UXT9 468 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 NPAS4Q8IUM7 802 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 FAM178BQ8IXR5 827 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 PABPC5Q96DU9 382 aaKnown RBP18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 LMAN2LQ9H0V9 348 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 SAMM50Q9Y512 469 aa18.65■□□□□ 0.58
AC004449.1-201ENST00000564240 GRXCR2A6NFK2 248 aa18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 FAM86B1E9PN63 330 aa18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 IPO5O00410 1097 aaKnown RBP18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 CCNE2O96020 404 aa18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 FAM86B2P0C5J1 330 aa18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 CLK2P49760 499 aaKnown RBP18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 ODR4Q5SWX8 454 aa18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 RTN4RL1Q86UN2 441 aaPredicted RBP18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 REXO1Q8N1G1 1221 aaKnown RBP18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 ATP8B4Q8TF62 1192 aa18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 ZNF689Q96CS4 500 aaPredicted RBP18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 LRFN3Q9BTN0 628 aa18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 ALG13Q9NP73 1137 aaKnown RBP18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 TBC1D22BQ9NU19 505 aa18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 PCDHB7Q9Y5E2 793 aa18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 NLRC5Q86WI3 1866 aa18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 TTC3P53804 2025 aa18.64■□□□□ 0.57
AC004449.1-201ENST00000564240 DENND3A2RUS2 1198 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 C5orf67F2Z3F1 127 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 PRPF3O43395 683 aaKnown RBP18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 PPFIA3O75145 1194 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 RPS6KA5O75582 802 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 CYP3A4P08684 503 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 PSMA5P28066 241 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 PRR16Q569H4 304 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 CCDC60Q8IWA6 550 aaPredicted RBP18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 CMTR2Q8IYT2 770 aaKnown RBP18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 METTL13Q8N6R0 699 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 BICD2Q8TD16 824 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 NEK9Q8TD19 979 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 CLP1Q92989 425 aaKnown RBP18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 PPP2R3CQ969Q6 453 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 CCDC136Q96JN2 1154 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 PPP1R16BQ96T49 567 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 PLVAPQ9BX97 442 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 CD320Q9NPF0 282 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 IGSF9BQ9UPX0 1349 aa18.63■□□□□ 0.57
AC004449.1-201ENST00000564240 PSAPP07602 524 aa18.62■□□□□ 0.57
AC004449.1-201ENST00000564240 CLUL1Q15846 466 aa18.62■□□□□ 0.57
AC004449.1-201ENST00000564240 LINC01599Q8WXQ3 324 aa18.62■□□□□ 0.57
AC004449.1-201ENST00000564240 PHKBQ93100 1093 aa18.62■□□□□ 0.57
AC004449.1-201ENST00000564240 FAM122AQ96E09 287 aa18.62■□□□□ 0.57
AC004449.1-201ENST00000564240 SLC26A6Q9BXS9 759 aa18.62■□□□□ 0.57
AC004449.1-201ENST00000564240 ZMYND12Q9H0C1 365 aa18.62■□□□□ 0.57
AC004449.1-201ENST00000564240 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms