RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 POTEB3A0JP26 581 aa19.04■□□□□ 0.64
CCNF-203ENST00000564236 UPP2O95045 317 aa19.04■□□□□ 0.64
CCNF-203ENST00000564236 REC8O95072 547 aa19.04■□□□□ 0.64
CCNF-203ENST00000564236 RB1P06400 928 aa19.04■□□□□ 0.64
CCNF-203ENST00000564236 CIITAP33076 1130 aa19.04■□□□□ 0.64
CCNF-203ENST00000564236 FGD1P98174 961 aa19.04■□□□□ 0.64
CCNF-203ENST00000564236 SETQ01105 290 aaPredicted RBP19.04■□□□□ 0.64
CCNF-203ENST00000564236 TIGD5Q53EQ6 642 aa19.04■□□□□ 0.64
CCNF-203ENST00000564236 POTEBQ6S5H4 581 aa19.04■□□□□ 0.64
CCNF-203ENST00000564236 ATP8B4Q8TF62 1192 aa19.04■□□□□ 0.64
CCNF-203ENST00000564236 NECAB3Q96P71 396 aaPredicted RBP19.04■□□□□ 0.64
CCNF-203ENST00000564236 RNF26Q9BY78 433 aaPredicted RBP19.04■□□□□ 0.64
CCNF-203ENST00000564236 UBE2ZQ9H832 354 aaPredicted RBP19.04■□□□□ 0.64
CCNF-203ENST00000564236 C6orf50Q9HD87 102 aa19.04■□□□□ 0.64
CCNF-203ENST00000564236 RWDD3Q9Y3V2 267 aa19.04■□□□□ 0.64
CCNF-203ENST00000564236 TRPV2Q9Y5S1 764 aa19.04■□□□□ 0.64
CCNF-203ENST00000564236 ADGRA3Q8IWK6 1321 aa19.03■□□□□ 0.64
CCNF-203ENST00000564236 IPO5O00410 1097 aaKnown RBP19.03■□□□□ 0.64
CCNF-203ENST00000564236 HBP1O60381 514 aa19.03■□□□□ 0.64
CCNF-203ENST00000564236 IFNAR1P17181 557 aa19.03■□□□□ 0.64
CCNF-203ENST00000564236 PSMA5P28066 241 aa19.03■□□□□ 0.64
CCNF-203ENST00000564236 GNA11P29992 359 aa19.03■□□□□ 0.64
CCNF-203ENST00000564236 IGBP1P78318 339 aa19.03■□□□□ 0.64
CCNF-203ENST00000564236 LEXMQ3ZCV2 418 aa19.03■□□□□ 0.64
CCNF-203ENST00000564236 JAKMIP3Q5VZ66 844 aa19.03■□□□□ 0.64
CCNF-203ENST00000564236 MTHFD1LQ6UB35 978 aa19.03■□□□□ 0.64
CCNF-203ENST00000564236 PLA2G4DQ86XP0 818 aa19.03■□□□□ 0.64
CCNF-203ENST00000564236 CCDC60Q8IWA6 550 aaPredicted RBP19.03■□□□□ 0.64
CCNF-203ENST00000564236 REXO1Q8N1G1 1221 aaKnown RBP19.03■□□□□ 0.64
CCNF-203ENST00000564236 LINC01599Q8WXQ3 324 aa19.03■□□□□ 0.64
CCNF-203ENST00000564236 TBC1D22BQ9NU19 505 aa19.03■□□□□ 0.64
CCNF-203ENST00000564236 ADAMTS3O15072 1205 aa19.02■□□□□ 0.64
CCNF-203ENST00000564236 DGKIO75912 1065 aa19.02■□□□□ 0.64
CCNF-203ENST00000564236 ZNF76P36508 570 aa19.02■□□□□ 0.64
CCNF-203ENST00000564236 GPM6BQ13491 265 aa19.02■□□□□ 0.64
CCNF-203ENST00000564236 FAM160B1Q5W0V3 765 aa19.02■□□□□ 0.64
CCNF-203ENST00000564236 ZNF746Q6NUN9 644 aaPredicted RBP19.02■□□□□ 0.64
CCNF-203ENST00000564236 RTN4RL1Q86UN2 441 aaPredicted RBP19.02■□□□□ 0.64
CCNF-203ENST00000564236 SMAP1Q8IYB5 467 aaPredicted RBP19.02■□□□□ 0.64
CCNF-203ENST00000564236 FIBCD1Q8N539 461 aa19.02■□□□□ 0.64
CCNF-203ENST00000564236 TRAPPC12Q8WVT3 735 aa19.02■□□□□ 0.64
CCNF-203ENST00000564236 ZBTB10Q96DT7 871 aa19.02■□□□□ 0.64
CCNF-203ENST00000564236 CELF4Q9BZC1 486 aaKnown RBP19.02■□□□□ 0.64
CCNF-203ENST00000564236 FAM49AQ9H0Q0 323 aaPredicted RBP19.02■□□□□ 0.64
CCNF-203ENST00000564236 LMAN2LQ9H0V9 348 aa19.02■□□□□ 0.64
CCNF-203ENST00000564236 MAFBQ9Y5Q3 323 aaPredicted RBP19.02■□□□□ 0.64
CCNF-203ENST00000564236 ZBTB42B2RXF5 422 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 M0QZ92 97 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 PDIA3P30101 505 aaKnown RBP19.01■□□□□ 0.63
CCNF-203ENST00000564236 CD52P31358 61 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 BMPR1AP36894 532 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 ZNF484Q5JVG2 852 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 MIS18BP1Q6P0N0 1132 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 BICD2Q8TD16 824 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 NEK9Q8TD19 979 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 LENG9Q96B70 501 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 CCDC136Q96JN2 1154 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 ZNF302Q9NR11 478 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 SH3GLB2Q9NR46 395 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 NAP1L2Q9ULW6 460 aaPredicted RBP19.01■□□□□ 0.63
CCNF-203ENST00000564236 PADI3Q9ULW8 664 aa19.01■□□□□ 0.63
CCNF-203ENST00000564236 ATP4AP20648 1035 aa19■□□□□ 0.63
CCNF-203ENST00000564236 NPAS4Q8IUM7 802 aa19■□□□□ 0.63
CCNF-203ENST00000564236 BANK1Q8NDB2 785 aa19■□□□□ 0.63
CCNF-203ENST00000564236 CCDC148Q8NFR7 591 aa19■□□□□ 0.63
CCNF-203ENST00000564236 PHKBQ93100 1093 aa19■□□□□ 0.63
CCNF-203ENST00000564236 ZNF577Q9BSK1 485 aa19■□□□□ 0.63
CCNF-203ENST00000564236 C11orf84Q9BUA3 381 aaPredicted RBP19■□□□□ 0.63
CCNF-203ENST00000564236 PLVAPQ9BX97 442 aa19■□□□□ 0.63
CCNF-203ENST00000564236 ZSWIM6Q9HCJ5 1215 aa19■□□□□ 0.63
CCNF-203ENST00000564236 RALGAPA2Q2PPJ7 1873 aa19■□□□□ 0.63
CCNF-203ENST00000564236 BACH1O14867 736 aa18.99■□□□□ 0.63
CCNF-203ENST00000564236 EDIL3O43854 480 aa18.99■□□□□ 0.63
CCNF-203ENST00000564236 KLRC1P26715 233 aa18.99■□□□□ 0.63
CCNF-203ENST00000564236 KRT76Q01546 638 aa18.99■□□□□ 0.63
CCNF-203ENST00000564236 PDXDC2PQ6P474 469 aa18.99■□□□□ 0.63
CCNF-203ENST00000564236 RUFY3Q7L099 469 aa18.99■□□□□ 0.63
CCNF-203ENST00000564236 CMTR2Q8IYT2 770 aaKnown RBP18.99■□□□□ 0.63
CCNF-203ENST00000564236 KIAA0319LQ8IZA0 1049 aa18.99■□□□□ 0.63
CCNF-203ENST00000564236 FAM177A1Q8N128 213 aaPredicted RBP18.99■□□□□ 0.63
CCNF-203ENST00000564236 BBXQ8WY36 941 aaPredicted RBP18.99■□□□□ 0.63
CCNF-203ENST00000564236 NSUN3Q9H649 340 aaKnown RBP18.99■□□□□ 0.63
CCNF-203ENST00000564236 TTC3P53804 2025 aa18.99■□□□□ 0.63
CCNF-203ENST00000564236 KAT6AQ92794 2004 aa18.99■□□□□ 0.63
CCNF-203ENST00000564236 DDX39AO00148 427 aaKnown RBP18.98■□□□□ 0.63
CCNF-203ENST00000564236 USP11P51784 963 aa18.98■□□□□ 0.63
CCNF-203ENST00000564236 AKAP17AQ02040 695 aaKnown RBP18.98■□□□□ 0.63
CCNF-203ENST00000564236 PAK2Q13177 524 aa18.98■□□□□ 0.63
CCNF-203ENST00000564236 TOB2Q14106 344 aaPredicted RBP18.98■□□□□ 0.63
CCNF-203ENST00000564236 PUS10Q3MIT2 529 aaKnown RBP18.98■□□□□ 0.63
CCNF-203ENST00000564236 NAALADL2Q58DX5 795 aa18.98■□□□□ 0.63
CCNF-203ENST00000564236 SWSAP1Q6NVH7 229 aa18.98■□□□□ 0.63
CCNF-203ENST00000564236 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.98■□□□□ 0.63
CCNF-203ENST00000564236 P2RX5Q93086 422 aa18.98■□□□□ 0.63
CCNF-203ENST00000564236 PABPC5Q96DU9 382 aaKnown RBP18.98■□□□□ 0.63
CCNF-203ENST00000564236 C1QTNF1Q9BXJ1 281 aa18.98■□□□□ 0.63
CCNF-203ENST00000564236 TM6SF1Q9BZW5 370 aa18.98■□□□□ 0.63
CCNF-203ENST00000564236 TMX1Q9H3N1 280 aa18.98■□□□□ 0.63
CCNF-203ENST00000564236 PCDHA10Q9Y5I2 948 aa18.98■□□□□ 0.63
CCNF-203ENST00000564236 NCK2O43639 380 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms