RNA–Protein interactions for RNA: ENST00000563492.1

CDH11-208, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 468 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-208ENST00000563492 PPP1R16BQ96T49 567 aa7.88□□□□□ -1.15
CDH11-208ENST00000563492 SDF4Q9BRK5 362 aa7.88□□□□□ -1.15
CDH11-208ENST00000563492 LARP6Q9BRS8 491 aaKnown RBP7.88□□□□□ -1.15
CDH11-208ENST00000563492 AZI2Q9H6S1 392 aa7.88□□□□□ -1.15
CDH11-208ENST00000563492 RC3H2Q9HBD1 1191 aaKnown RBP7.88□□□□□ -1.15
CDH11-208ENST00000563492 NCOA5Q9HCD5 579 aaKnown RBP7.88□□□□□ -1.15
CDH11-208ENST00000563492 ALG13Q9NP73 1137 aaKnown RBP7.88□□□□□ -1.15
CDH11-208ENST00000563492 RBM28Q9NW13 759 aaKnown RBP7.88□□□□□ -1.15
CDH11-208ENST00000563492 PADI3Q9ULW8 664 aa7.88□□□□□ -1.15
CDH11-208ENST00000563492 GINS2Q9Y248 185 aa7.88□□□□□ -1.15
CDH11-208ENST00000563492 SNX14Q9Y5W7 946 aa7.88□□□□□ -1.15
CDH11-208ENST00000563492 NFASCO94856 1347 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 IGKV6D-21A0A0A0MT36 114 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 GRXCR2A6NFK2 248 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 RRN3P2A6NIE6 340 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 ZBTB42B2RXF5 422 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 LINC01565O15544 149 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 MGEA5O60502 916 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 DGKIO75912 1065 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 FOSP01100 380 aaPredicted RBP7.87□□□□□ -1.15
CDH11-208ENST00000563492 SCG2P13521 617 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 ZNF76P36508 570 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 LTBRP36941 435 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 CCT2P78371 535 aaKnown RBP7.87□□□□□ -1.15
CDH11-208ENST00000563492 BTG3Q14201 252 aaPredicted RBP7.87□□□□□ -1.15
CDH11-208ENST00000563492 CLUL1Q15846 466 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 NTRK3Q16288 839 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 PFKFB3Q16875 520 aaPredicted RBP7.87□□□□□ -1.15
CDH11-208ENST00000563492 LEXMQ3ZCV2 418 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 PAN2Q504Q3 1202 aaKnown RBP7.87□□□□□ -1.15
CDH11-208ENST00000563492 PTCRAQ6ISU1 281 aaPredicted RBP7.87□□□□□ -1.15
CDH11-208ENST00000563492 TSHZ1Q6ZSZ6 1077 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 PLPPR4Q7Z2D5 763 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 RSPH3Q86UC2 560 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 FAM178BQ8IXR5 827 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 KIAA0319LQ8IZA0 1049 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 NEK9Q8TD19 979 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 KCNB2Q92953 911 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 LRFN3Q9BTN0 628 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 CELF4Q9BZC1 486 aaKnown RBP7.87□□□□□ -1.15
CDH11-208ENST00000563492 HCSTQ9UBK5 93 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 NOC2LQ9Y3T9 749 aaKnown RBP7.87□□□□□ -1.15
CDH11-208ENST00000563492 PCDHGC5Q9Y5F6 944 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 PCDHA2Q9Y5H9 948 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 TRPV2Q9Y5S1 764 aa7.87□□□□□ -1.15
CDH11-208ENST00000563492 MRPL42Q9Y6G3 142 aaKnown RBP7.87□□□□□ -1.15
CDH11-208ENST00000563492 COL4A4P53420 1690 aaPredicted RBP7.86□□□□□ -1.15
CDH11-208ENST00000563492 ADGRA3Q8IWK6 1321 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 IPO5O00410 1097 aaKnown RBP7.86□□□□□ -1.15
CDH11-208ENST00000563492 BACH1O14867 736 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 HSPA4P34932 840 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 IRS1P35568 1242 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 METAP2P50579 478 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDH11-208ENST00000563492 FGD1P98174 961 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 KRT76Q01546 638 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 HYAL1Q12794 435 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 NFX1Q12986 1120 aaKnown RBP7.86□□□□□ -1.15
CDH11-208ENST00000563492 PTPROQ16827 1216 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 KIZQ2M2Z5 673 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 PRR16Q569H4 304 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 IER5Q5VY09 327 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 PPP1R18Q6NYC8 613 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 PDXDC2PQ6P474 469 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 ATP8B4Q8TF62 1192 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 CLP1Q92989 425 aaKnown RBP7.86□□□□□ -1.15
CDH11-208ENST00000563492 ZNF668Q96K58 619 aaPredicted RBP7.86□□□□□ -1.15
CDH11-208ENST00000563492 SAMD11Q96NU1 681 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 NSUN3Q9H649 340 aaKnown RBP7.86□□□□□ -1.15
CDH11-208ENST00000563492 IGFLR1Q9H665 355 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 CLDND1Q9NY35 253 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 VPS54Q9P1Q0 977 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 PLAGL2Q9UPG8 496 aa7.86□□□□□ -1.15
CDH11-208ENST00000563492 IGSF9BQ9UPX0 1349 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 SMIM35A0A1B0GVV1 85 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 C5orf67F2Z3F1 127 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 PRPF3O43395 683 aaKnown RBP7.85□□□□□ -1.15
CDH11-208ENST00000563492 C22orf31O95567 290 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 VTNP04004 478 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 ITGB1P05556 798 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 CYP3A4P08684 503 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 RPS6KB1P23443 525 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 PDIA3P30101 505 aaKnown RBP7.85□□□□□ -1.15
CDH11-208ENST00000563492 RBM10P98175 930 aaKnown RBP7.85□□□□□ -1.15
CDH11-208ENST00000563492 PAK2Q13177 524 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 AP3B2Q13367 1082 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 KRT32Q14532 448 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 COL19A1Q14993 1142 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 FAM102BQ5T8I3 360 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 BLOC1S2Q6QNY1 142 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 NIPA1Q7RTP0 329 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 ADGRD2Q7Z7M1 963 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 GJD3Q8N144 294 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 KLHL23Q8NBE8 558 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 SPPL3Q8TCT6 385 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 LENG9Q96B70 501 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 PABPC5Q96DU9 382 aaKnown RBP7.85□□□□□ -1.15
CDH11-208ENST00000563492 ZNF577Q9BSK1 485 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 C1QTNF1Q9BXJ1 281 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 SLC26A6Q9BXS9 759 aa7.85□□□□□ -1.15
CDH11-208ENST00000563492 ZMYND12Q9H0C1 365 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms