RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CASP5P51878 434 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 SWSAP1Q6NVH7 229 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 RGMBQ6NW40 437 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 PADI6Q6TGC4 694 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 TRMT1LQ7Z2T5 733 aaKnown RBP20.01■□□□□ 0.79
COMMD4-208ENST00000563220 VSTM4Q8IW00 320 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 SH2D3AQ9BRG2 576 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 GABBR1Q9UBS5 961 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 COL4A3BPQ9Y5P4 624 aa20.01■□□□□ 0.79
COMMD4-208ENST00000563220 IGF2BP3O00425 579 aaKnown RBP eCLIP20■□□□□ 0.79
COMMD4-208ENST00000563220 TEX33O43247 280 aa20■□□□□ 0.79
COMMD4-208ENST00000563220 ZNF862O60290 1169 aa20■□□□□ 0.79
COMMD4-208ENST00000563220 PSAPP07602 524 aa20■□□□□ 0.79
COMMD4-208ENST00000563220 UBA1P22314 1058 aaKnown RBP20■□□□□ 0.79
COMMD4-208ENST00000563220 GUCY2CP25092 1073 aa20■□□□□ 0.79
COMMD4-208ENST00000563220 ARID5BQ14865 1188 aa20■□□□□ 0.79
COMMD4-208ENST00000563220 UTP14CQ5TAP6 766 aaKnown RBP20■□□□□ 0.79
COMMD4-208ENST00000563220 CREBRFQ8IUR6 639 aa20■□□□□ 0.79
COMMD4-208ENST00000563220 MORC4Q8TE76 937 aa20■□□□□ 0.79
COMMD4-208ENST00000563220 KIAA1217Q5T5P2 1943 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 TPM3P06753 285 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 SPAG1Q07617 926 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 CCDC60Q8IWA6 550 aaPredicted RBP19.99■□□□□ 0.79
COMMD4-208ENST00000563220 NELFCDQ8IXH7 590 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 NOC3LQ8WTT2 800 aaKnown RBP19.99■□□□□ 0.79
COMMD4-208ENST00000563220 CTAGE1Q96RT6 745 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 FAM13AO94988 1023 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 STBD1O95210 358 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 ATG7O95352 703 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 TGFB3P10600 412 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 ADORA2AP29274 412 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 ZNF131P52739 623 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 ZNF792Q3KQV3 632 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 ZCWPW2Q504Y3 356 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 ANO5Q75V66 913 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 EPM2AIP1Q7L775 607 aaPredicted RBP19.99■□□□□ 0.79
COMMD4-208ENST00000563220 CACTINQ8WUQ7 758 aaKnown RBP19.99■□□□□ 0.79
COMMD4-208ENST00000563220 MPHOSPH6Q99547 160 aaKnown RBP19.99■□□□□ 0.79
COMMD4-208ENST00000563220 TAB2Q9NYJ8 693 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 IMPACTQ9P2X3 320 aa19.99■□□□□ 0.79
COMMD4-208ENST00000563220 MANSC4A6NHS7 340 aaPredicted RBP19.98■□□□□ 0.79
COMMD4-208ENST00000563220 BACH1O14867 736 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 ARIH2O95376 493 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 MYBP10242 640 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 GAP43P17677 238 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 MSNP26038 577 aaKnown RBP19.98■□□□□ 0.79
COMMD4-208ENST00000563220 COPB1P53618 953 aaKnown RBP19.98■□□□□ 0.79
COMMD4-208ENST00000563220 NPEPPSP55786 919 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 LRRC63Q05C16 580 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 MAPK7Q13164 816 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 LY6KQ17RY6 165 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 FAM110CQ1W6H9 321 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 PLA2G4FQ68DD2 849 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 DAW1Q8N136 415 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 MYCT1Q8N699 235 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 FIZ1Q96SL8 496 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 VPS16Q9H269 839 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 KCTD10Q9H3F6 313 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 PARVGQ9HBI0 331 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 OLFML3Q9NRN5 406 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 ANKEF1Q9NU02 776 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 ODF2LQ9ULJ1 636 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 SYNGAP1Q96PV0 1343 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 TRPM7Q96QT4 1865 aa19.98■□□□□ 0.79
COMMD4-208ENST00000563220 HIP1RO75146 1068 aa19.97■□□□□ 0.79
COMMD4-208ENST00000563220 FARP2O94887 1054 aaPredicted RBP19.97■□□□□ 0.79
COMMD4-208ENST00000563220 SUPT20HL2P0C7V6 817 aa19.97■□□□□ 0.79
COMMD4-208ENST00000563220 HOXD13P35453 343 aa19.97■□□□□ 0.79
COMMD4-208ENST00000563220 LRMPQ12912 555 aa19.97■□□□□ 0.79
COMMD4-208ENST00000563220 MIS18BP1Q6P0N0 1132 aa19.97■□□□□ 0.79
COMMD4-208ENST00000563220 FOXR2Q6PJQ5 311 aa19.97■□□□□ 0.79
COMMD4-208ENST00000563220 MAEAQ7L5Y9 396 aa19.97■□□□□ 0.79
COMMD4-208ENST00000563220 FBXO16Q8IX29 292 aaPredicted RBP19.97■□□□□ 0.79
COMMD4-208ENST00000563220 ABRAQ8N0Z2 381 aa19.97■□□□□ 0.79
COMMD4-208ENST00000563220 ATP6V0A1Q93050 837 aa19.97■□□□□ 0.79
COMMD4-208ENST00000563220 MRPL44Q9H9J2 332 aaKnown RBP19.97■□□□□ 0.79
COMMD4-208ENST00000563220 DDX41Q9UJV9 622 aaKnown RBP19.97■□□□□ 0.79
COMMD4-208ENST00000563220 KIF3CO14782 793 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 STRNO43815 780 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 PRPF6O94906 941 aaKnown RBP19.96■□□□□ 0.79
COMMD4-208ENST00000563220 EEF1GP26641 437 aaKnown RBP19.96■□□□□ 0.79
COMMD4-208ENST00000563220 NEDD9Q14511 834 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 XKR9Q5GH70 373 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 GPR142Q7Z601 462 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 GPBP1L1Q9HC44 474 aaPredicted RBP19.96■□□□□ 0.79
COMMD4-208ENST00000563220 CPA4Q9UI42 421 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 LOC102724159A0A0B4J2E5 919 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 GSTTP1A0A1W2PQM5 241 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 ASB14A6NK59 587 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 NKRFO15226 690 aaKnown RBP eCLIP19.96■□□□□ 0.79
COMMD4-208ENST00000563220 ZNF500O60304 480 aaPredicted RBP19.96■□□□□ 0.79
COMMD4-208ENST00000563220 USO1O60763 962 aaKnown RBP19.96■□□□□ 0.79
COMMD4-208ENST00000563220 GGPS1O95749 300 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 SLC10A3P09131 477 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 NMT1P30419 496 aaKnown RBP19.96■□□□□ 0.79
COMMD4-208ENST00000563220 PBX1P40424 430 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 PWP2Q15269 919 aaKnown RBP19.96■□□□□ 0.79
COMMD4-208ENST00000563220 FILIP1LQ4L180 1135 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 LRRC55Q6ZSA7 311 aa19.96■□□□□ 0.79
COMMD4-208ENST00000563220 LRRC8AQ8IWT6 810 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms