RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 CIITAP33076 1130 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 HSPA9P38646 679 aaKnown RBP14.32□□□□□ -0.12
USB1-207ENST00000563149 MRPS25P82663 173 aaKnown RBP14.32□□□□□ -0.12
USB1-207ENST00000563149 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
USB1-207ENST00000563149 ARID5AQ03989 594 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 PTK2Q05397 1052 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 NFIL3Q16649 462 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 SLFN13Q68D06 897 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.32□□□□□ -0.12
USB1-207ENST00000563149 GPIHBP1Q8IV16 184 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 SYCE1Q8N0S2 351 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 IFT81Q8WYA0 676 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 POLR3CQ9BUI4 534 aaPredicted RBP14.32□□□□□ -0.12
USB1-207ENST00000563149 AMNQ9BXJ7 453 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 PACSIN1Q9BY11 444 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 ZHX3Q9H4I2 956 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 NAGPAQ9UK23 515 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 DAAM1Q9Y4D1 1078 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 ATXN2Q99700 1313 aaKnown RBP14.32□□□□□ -0.12
USB1-207ENST00000563149 POTEFA5A3E0 1075 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 HMGB1P1B2RPK0 211 aaPredicted RBP14.32□□□□□ -0.12
USB1-207ENST00000563149 TOM1O60784 492 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 POTEIP0CG38 1075 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 SPATA31C1P0DKV0 1188 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 GAP43P17677 238 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 SLC9A1P19634 815 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 SREBF1P36956 1147 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 EPHA7Q15375 998 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 ALKBH5Q6P6C2 394 aaKnown RBP14.32□□□□□ -0.12
USB1-207ENST00000563149 POTEGQ6S5H5 508 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 POTEEQ6S8J3 1075 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 B4GALNT4Q76KP1 1039 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 SFR1Q86XK3 245 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 FMNL3Q8IVF7 1028 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 LRRC57Q8N9N7 239 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 REEP2Q9BRK0 252 aa14.32□□□□□ -0.12
USB1-207ENST00000563149 F8W031 263 aaPredicted RBP14.31□□□□□ -0.12
USB1-207ENST00000563149 KCNK3O14649 394 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 RIMBP2O15034 1052 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 RAD51CO43502 376 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 EYA4O95677 639 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 FAM153BP0C7A2 387 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 FERP16591 822 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 STAT3P40763 770 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 CCT5P48643 541 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 JAM2P57087 298 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 FAM153CQ494X1 144 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 TTC31Q49AM3 519 aaPredicted RBP14.31□□□□□ -0.12
USB1-207ENST00000563149 APOBEC3HQ6NTF7 200 aaKnown RBP14.31□□□□□ -0.12
USB1-207ENST00000563149 SLFN11Q7Z7L1 901 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 RASGEF1CQ8N431 466 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 PIK3R5Q8WYR1 880 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 LRRC45Q96CN5 670 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 OLFML3Q9NRN5 406 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 LRRC4BQ9NT99 713 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 FAM153AQ9UHL3 310 aa14.31□□□□□ -0.12
USB1-207ENST00000563149 ZNF233A6NK53 670 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 SPDYE3A6NKU9 549 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 PGRMC1O00264 195 aaKnown RBP14.3□□□□□ -0.12
USB1-207ENST00000563149 POLRMTO00411 1230 aaKnown RBP14.3□□□□□ -0.12
USB1-207ENST00000563149 EIF3DO15371 548 aaKnown RBP eCLIP14.3□□□□□ -0.12
USB1-207ENST00000563149 NPM3O75607 178 aaKnown RBP14.3□□□□□ -0.12
USB1-207ENST00000563149 CYP3A4P08684 503 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 H2AFZP0C0S5 128 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 ACTN1P12814 892 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 EEF2P13639 858 aaKnown RBP14.3□□□□□ -0.12
USB1-207ENST00000563149 NOP2P46087 812 aaKnown RBP14.3□□□□□ -0.12
USB1-207ENST00000563149 CASP5P51878 434 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 SLC15A2Q16348 729 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 CERKLQ49MI3 558 aaPredicted RBP14.3□□□□□ -0.12
USB1-207ENST00000563149 PRR16Q569H4 304 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 H2AFVQ71UI9 128 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 TADA2BQ86TJ2 420 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 FBXO11Q86XK2 927 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 ARFGAP2Q8N6H7 521 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 TPCN2Q8NHX9 752 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 ATP6V1G3Q96LB4 118 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.3□□□□□ -0.12
USB1-207ENST00000563149 PAGR1Q9BTK6 254 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 PLEKHA4Q9H4M7 779 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 SUCLA2Q9P2R7 463 aaPredicted RBP14.3□□□□□ -0.12
USB1-207ENST00000563149 USP21Q9UK80 565 aa14.3□□□□□ -0.12
USB1-207ENST00000563149 DIS3Q9Y2L1 958 aaKnown RBP14.3□□□□□ -0.12
USB1-207ENST00000563149 NR3C1P04150 777 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 HMGB2P26583 209 aaKnown RBP14.29□□□□□ -0.12
USB1-207ENST00000563149 HOXD13P35453 343 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 TRAF1Q13077 416 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 PABPC4Q13310 644 aaKnown RBP eCLIP14.29□□□□□ -0.12
USB1-207ENST00000563149 GMCL1P1Q8NEA9 526 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 BBXQ8WY36 941 aaPredicted RBP14.29□□□□□ -0.12
USB1-207ENST00000563149 LENG9Q96B70 501 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 GMCL1Q96IK5 515 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 ZDHHC15Q96MV8 337 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 MKNK1Q9BUB5 465 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 SLITRK6Q9H5Y7 841 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 SIX2Q9NPC8 291 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 PI4KBQ9UBF8 816 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 PACSIN2Q9UNF0 486 aaPredicted RBP14.29□□□□□ -0.12
USB1-207ENST00000563149 STXBP5LQ9Y2K9 1186 aa14.29□□□□□ -0.12
USB1-207ENST00000563149 FAM169AQ9Y6X4 670 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms