RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 C7orf61Q8IZ16 206 aa11.01□□□□□ -0.65
CLK3-208ENST00000562626 IGSF22Q8N9C0 903 aa11.01□□□□□ -0.65
CLK3-208ENST00000562626 LMBR1Q8WVP7 490 aa11.01□□□□□ -0.65
CLK3-208ENST00000562626 DHX38Q92620 1227 aaKnown RBP11.01□□□□□ -0.65
CLK3-208ENST00000562626 CLIC6Q96NY7 704 aa11.01□□□□□ -0.65
CLK3-208ENST00000562626 CEP89Q96ST8 783 aa11.01□□□□□ -0.65
CLK3-208ENST00000562626 EIF2AK1Q9BQI3 630 aaKnown RBP11.01□□□□□ -0.65
CLK3-208ENST00000562626 SMARCAD1Q9H4L7 1026 aa11.01□□□□□ -0.65
CLK3-208ENST00000562626 PDLIM7Q9NR12 457 aa11.01□□□□□ -0.65
CLK3-208ENST00000562626 ERAP1Q9NZ08 941 aa11.01□□□□□ -0.65
CLK3-208ENST00000562626 GTF2IRD1Q9UHL9 959 aa11.01□□□□□ -0.65
CLK3-208ENST00000562626 FBXO2Q9UK22 296 aaPredicted RBP11.01□□□□□ -0.65
CLK3-208ENST00000562626 A0A0C4DFX4 3053 aa11□□□□□ -0.65
CLK3-208ENST00000562626 TRIM43BA6NCK2 446 aa11□□□□□ -0.65
CLK3-208ENST00000562626 TREHO43280 583 aa11□□□□□ -0.65
CLK3-208ENST00000562626 CYP2C9P11712 490 aa11□□□□□ -0.65
CLK3-208ENST00000562626 INSRRP14616 1297 aa11□□□□□ -0.65
CLK3-208ENST00000562626 SFNP31947 248 aa11□□□□□ -0.65
CLK3-208ENST00000562626 PRPHP41219 470 aa11□□□□□ -0.65
CLK3-208ENST00000562626 SPECC1Q5M775 1068 aa11□□□□□ -0.65
CLK3-208ENST00000562626 PLA2G4FQ68DD2 849 aa11□□□□□ -0.65
CLK3-208ENST00000562626 RUFY4Q6ZNE9 571 aa11□□□□□ -0.65
CLK3-208ENST00000562626 ANO5Q75V66 913 aa11□□□□□ -0.65
CLK3-208ENST00000562626 RDM1Q8NG50 284 aa11□□□□□ -0.65
CLK3-208ENST00000562626 ATP8B4Q8TF62 1192 aa11□□□□□ -0.65
CLK3-208ENST00000562626 TRIM43Q96BQ3 446 aaPredicted RBP11□□□□□ -0.65
CLK3-208ENST00000562626 HSD17B14Q9BPX1 270 aa11□□□□□ -0.65
CLK3-208ENST00000562626 LXNQ9BS40 222 aa11□□□□□ -0.65
CLK3-208ENST00000562626 TBX21Q9UL17 535 aa11□□□□□ -0.65
CLK3-208ENST00000562626 TRIP11Q15643 1979 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 POTEB3A0JP26 581 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 LAD1O00515 517 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 OATP04181 439 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 SYN1P17600 705 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 IGBP1P78318 339 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 PPFIA1Q13136 1202 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 SLC39A14Q15043 492 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 GRIK4Q16099 956 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 TRIM71Q2Q1W2 868 aaKnown RBP10.99□□□□□ -0.65
CLK3-208ENST00000562626 FAM160B1Q5W0V3 765 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 POTEBQ6S5H4 581 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 POTEGQ6S5H5 508 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 KCNK18Q7Z418 384 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 CATSPER3Q86XQ3 398 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 C7orf31Q8N865 590 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 LINC00301Q8NCQ3 95 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 PNMA5Q96PV4 448 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 KATNAL1Q9BW62 490 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 OSBPL7Q9BZF2 842 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 AZI2Q9H6S1 392 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 ZNF215Q9UL58 517 aaPredicted RBP10.99□□□□□ -0.65
CLK3-208ENST00000562626 ZMYND8Q9ULU4 1186 aaPredicted RBP10.99□□□□□ -0.65
CLK3-208ENST00000562626 TRPC6Q9Y210 931 aa10.99□□□□□ -0.65
CLK3-208ENST00000562626 P4HBP07237 508 aaKnown RBP10.98□□□□□ -0.65
CLK3-208ENST00000562626 CLTBP09497 229 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 QARSP47897 775 aaKnown RBP10.98□□□□□ -0.65
CLK3-208ENST00000562626 NPEPPSP55786 919 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 PSMC5P62195 406 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 PTPN11Q06124 597 aaPredicted RBP10.98□□□□□ -0.65
CLK3-208ENST00000562626 GRB10Q13322 594 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 TARBP2Q15633 366 aaKnown RBP10.98□□□□□ -0.65
CLK3-208ENST00000562626 PTGISQ16647 500 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 ARL6IP4Q66PJ3 421 aaKnown RBP10.98□□□□□ -0.65
CLK3-208ENST00000562626 DTHD1Q6ZMT9 781 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 TPH2Q8IWU9 490 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 CKAP2LQ8IYA6 745 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 DPF3Q92784 378 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 VWCEQ96DN2 955 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 TOX2Q96NM4 488 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 CSRNP2Q9H175 543 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 WNT8AQ9H1J5 351 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 GDPD2Q9HCC8 539 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 PRDM5Q9NQX1 630 aaPredicted RBP10.98□□□□□ -0.65
CLK3-208ENST00000562626 LRWD1Q9UFC0 647 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 SEPT9Q9UHD8 586 aaPredicted RBP10.98□□□□□ -0.65
CLK3-208ENST00000562626 TCEAL9Q9UHQ7 104 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 KIAA1671Q9BY89 1806 aa10.98□□□□□ -0.65
CLK3-208ENST00000562626 A0A087X0B3 334 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 C17orf102A2RUQ5 167 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 MBLAC1A4D2B0 266 aaPredicted RBP10.97□□□□□ -0.65
CLK3-208ENST00000562626 KIAA0355O15063 1070 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 EVI5O60447 810 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 C22orf31O95567 290 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 CYP2C18P33260 490 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 CCT6AP40227 531 aaKnown RBP10.97□□□□□ -0.65
CLK3-208ENST00000562626 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
CLK3-208ENST00000562626 DRP2Q13474 957 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 PDIA5Q14554 519 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 STK38Q15208 465 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 TMEM266Q2M3C6 531 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 MTERF2Q49AM1 385 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 AXDND1Q5T1B0 1012 aaPredicted RBP10.97□□□□□ -0.65
CLK3-208ENST00000562626 TRAF7Q6Q0C0 670 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 SERINC5Q86VE9 423 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 C4orf19Q8IY42 314 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 LINC01465Q8N7H1 131 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 SNX29Q8TEQ0 813 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 PIGOQ8TEQ8 1089 aa10.97□□□□□ -0.65
CLK3-208ENST00000562626 BBXQ8WY36 941 aaPredicted RBP10.97□□□□□ -0.65
CLK3-208ENST00000562626 ATP6V0A1Q93050 837 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms