RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 SLC17A8Q8NDX2 589 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 NSUN7Q8NE18 718 aaKnown RBP12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 MAFAQ8NHW3 353 aaPredicted RBP12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 FAM49AQ9H0Q0 323 aaPredicted RBP12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 ORC3Q9UBD5 711 aaPredicted RBP12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 TRPC6Q9Y210 931 aa12.58□□□□□ -0.4
LPCAT4-202ENST00000562404 TTC3P53804 2025 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 CYP3A7-CYP3A51PA0A087WV96 503 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 BACH1O14867 736 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 SLC37A4O43826 429 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 ZNF862O60290 1169 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 GJB5O95377 273 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 GHRP10912 638 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 CYP3A7P24462 503 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 KCNJ6P48051 423 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 IKBKEQ14164 716 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 LPIN1Q14693 890 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 ANKRD1Q15327 319 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 UGCGQ16739 394 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 ZNF746Q6NUN9 644 aaPredicted RBP12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 TAF2Q6P1X5 1199 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 PDXDC2PQ6P474 469 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 TRMT1LQ7Z2T5 733 aaKnown RBP12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 ATP8B4Q8TF62 1192 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 SLC5A5Q92911 643 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 MBOAT7Q96N66 472 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 UNC45AQ9H3U1 944 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 AGO3Q9H9G7 860 aaKnown RBP12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 ZNF302Q9NR11 478 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 TBC1D22BQ9NU19 505 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 MAFBQ9Y5Q3 323 aaPredicted RBP12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 CDY2AQ9Y6F7 541 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 COL4A6Q14031 1691 aa12.57□□□□□ -0.4
LPCAT4-202ENST00000562404 ATG2AQ2TAZ0 1938 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 RRN3P2A6NIE6 340 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 TLL1O43897 1013 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 PSMD10O75832 226 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 CDKL5O76039 1030 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 FOSBP53539 338 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 NR5A1Q13285 461 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 Q4G0T1 1027 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 FBXO47Q5MNV8 452 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 KRT40Q6A162 431 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 MIS18BP1Q6P0N0 1132 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 MTHFD1LQ6UB35 978 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 B3GNT9Q6UX72 402 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 ETNPPLQ8TBG4 499 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 IFIH1Q9BYX4 1025 aaKnown RBP12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 CDHR5Q9HBB8 845 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 PRDM6Q9NQX0 595 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 GABBR1Q9UBS5 961 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 PCDHA2Q9Y5H9 948 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 PCDHA10Q9Y5I2 948 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 IGSF9BQ9UPX0 1349 aa12.56□□□□□ -0.4
LPCAT4-202ENST00000562404 KIAA1671Q9BY89 1806 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 WNT7AO00755 349 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 CHMP2AO43633 222 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 HBP1O60381 514 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 KLRC1P26715 233 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 SLC26A2P50443 739 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 MRPS6P82932 125 aaKnown RBP12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 KRT76Q01546 638 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 NONOQ15233 471 aaKnown RBP eCLIP12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 FAM160B1Q5W0V3 765 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 GALNT17Q6IS24 598 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 MYOCDQ8IZQ8 938 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 LINC01599Q8WXQ3 324 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 SEPT8Q92599 483 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 TNFRSF25Q93038 417 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 DISC1Q9NRI5 854 aa12.55□□□□□ -0.4
LPCAT4-202ENST00000562404 XIRP2A4UGR9 3374 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 SMIM35A0A1B0GVV1 85 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 WDR64B1ANS9 1081 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 GAS7O60861 476 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 STBD1O95210 358 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 C22orf31O95567 290 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 PSAPP07602 524 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 CD52P31358 61 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 LETM2Q2VYF4 491 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 LRCH2Q5VUJ6 765 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 PIK3AP1Q6ZUJ8 805 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 KRT25Q7Z3Z0 450 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 RTN4RL1Q86UN2 441 aaPredicted RBP12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 SMAP1Q8IYB5 467 aaPredicted RBP12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 KIAA0319LQ8IZA0 1049 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 FAM177A1Q8N128 213 aaPredicted RBP12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 PPM1EQ8WY54 764 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 ARNTL2Q8WYA1 636 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 TOP1MTQ969P6 601 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 GAS2L1Q99501 681 aaPredicted RBP12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 RIT2Q99578 217 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 RAD9AQ99638 391 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 ZBED2Q9BTP6 218 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 C22orf23Q9BZE7 217 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 SAMM50Q9Y512 469 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 COL1A2P08123 1366 aa12.54□□□□□ -0.4
LPCAT4-202ENST00000562404 ARID2Q68CP9 1835 aa12.53□□□□□ -0.4
LPCAT4-202ENST00000562404 RALGAPA2Q2PPJ7 1873 aa12.53□□□□□ -0.4
LPCAT4-202ENST00000562404 LINC01553A4QN01 128 aa12.53□□□□□ -0.4
LPCAT4-202ENST00000562404 TMEM150BA6NC51 233 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms