RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 CRTC3Q6UUV7 619 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 USP50Q70EL3 339 aaPredicted RBP7.2□□□□□ -1.26
UBR1-203ENST00000562173 NIM1KQ8IY84 436 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 JDP2Q8WYK2 163 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 SGSM3Q96HU1 749 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 PSMD1Q99460 953 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 NOL6Q9H6R4 1146 aaKnown RBP7.2□□□□□ -1.26
UBR1-203ENST00000562173 DBNDD1Q9H9R9 158 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 ADARB2Q9NS39 739 aaKnown RBP7.2□□□□□ -1.26
UBR1-203ENST00000562173 ZNF281Q9Y2X9 895 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 SUGT1Q9Y2Z0 365 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 CEMIPQ8WUJ3 1361 aa7.2□□□□□ -1.26
UBR1-203ENST00000562173 RBBP6Q7Z6E9 1792 aaKnown RBP7.19□□□□□ -1.26
UBR1-203ENST00000562173 BTBD11A6QL63 1104 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 H0Y8X5 98 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 PSMD14O00487 310 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 PDPK1O15530 556 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 NTSR2O95665 410 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 TEFQ10587 303 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 DUSP4Q13115 394 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 ADAT2Q7Z6V5 191 aaKnown RBP7.19□□□□□ -1.26
UBR1-203ENST00000562173 RASAL3Q86YV0 1011 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 RTKN2Q8IZC4 609 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 BVESQ8NE79 360 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 FGD4Q96M96 766 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 FMNL2Q96PY5 1086 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 DEPDC7Q96QD5 511 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 MXD3Q9BW11 206 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 APEX2Q9UBZ4 518 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 CNOT7Q9UIV1 285 aaKnown RBP7.19□□□□□ -1.26
UBR1-203ENST00000562173 TMEM59LQ9UK28 342 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 RRP7AQ9Y3A4 280 aaKnown RBP7.19□□□□□ -1.26
UBR1-203ENST00000562173 EMC9Q9Y3B6 208 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 OTOFQ9HC10 1997 aa7.19□□□□□ -1.26
UBR1-203ENST00000562173 SSU72P8A0A1W2PR75 194 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 NOP56O00567 594 aaKnown RBP7.18□□□□□ -1.26
UBR1-203ENST00000562173 SYPP08247 313 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 PRKAR2BP31323 418 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 NOP2P46087 812 aaKnown RBP7.18□□□□□ -1.26
UBR1-203ENST00000562173 RGMBQ6NW40 437 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 ZNF227Q86WZ6 799 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 KRTAP1-3Q8IUG1 177 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 TRIM59Q8IWR1 403 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 ADCY4Q8NFM4 1077 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 PI4K2BQ8TCG2 481 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 BRF1Q92994 677 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 FCRL2Q96LA5 508 aaPredicted RBP7.18□□□□□ -1.26
UBR1-203ENST00000562173 FOXP3Q9BZS1 431 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 GBA2Q9HCG7 927 aaPredicted RBP7.18□□□□□ -1.26
UBR1-203ENST00000562173 ST7Q9NRC1 585 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 SNTG2Q9NY99 539 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 PGAP2Q9UHJ9 254 aa7.18□□□□□ -1.26
UBR1-203ENST00000562173 ALPK3Q96L96 1907 aa7.17□□□□□ -1.26
UBR1-203ENST00000562173 PAX4O43316 350 aa7.17□□□□□ -1.26
UBR1-203ENST00000562173 DIAPH1O60610 1272 aaKnown RBP7.17□□□□□ -1.26
UBR1-203ENST00000562173 VAV1P15498 845 aa7.17□□□□□ -1.26
UBR1-203ENST00000562173 AMPD2Q01433 879 aa7.17□□□□□ -1.26
UBR1-203ENST00000562173 ZNF792Q3KQV3 632 aa7.17□□□□□ -1.26
UBR1-203ENST00000562173 CYP2R1Q6VVX0 501 aa7.17□□□□□ -1.26
UBR1-203ENST00000562173 CBLL1Q75N03 491 aa7.17□□□□□ -1.26
UBR1-203ENST00000562173 CTU1Q7Z7A3 348 aaKnown RBP7.17□□□□□ -1.26
UBR1-203ENST00000562173 LRRC47Q8N1G4 583 aaKnown RBP7.17□□□□□ -1.26
UBR1-203ENST00000562173 RPGRQ92834 1020 aaKnown RBP7.17□□□□□ -1.26
UBR1-203ENST00000562173 ZDHHC15Q96MV8 337 aa7.17□□□□□ -1.26
UBR1-203ENST00000562173 AKT3Q9Y243 479 aa7.17□□□□□ -1.26
UBR1-203ENST00000562173 CEP290O15078 2479 aa7.17□□□□□ -1.26
UBR1-203ENST00000562173 TMEM82A0PJX8 343 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 WASH4PA8MWX3 477 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 UBE2Q2LH0YL09 131 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 MEIS1O00470 390 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 EN2P19622 333 aaPredicted RBP7.16□□□□□ -1.26
UBR1-203ENST00000562173 CHRNEQ04844 493 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 IFRD2Q12894 506 aaPredicted RBP7.16□□□□□ -1.26
UBR1-203ENST00000562173 PRKG1Q13976 671 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 KRT24Q2M2I5 525 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 SV2CQ496J9 727 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 MTERF2Q49AM1 385 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 LCE3BQ5TA77 95 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 RCSD1Q6JBY9 416 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 KRT26Q7Z3Y9 468 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 CELF1Q92879 486 aaKnown RBP7.16□□□□□ -1.26
UBR1-203ENST00000562173 CDCA5Q96FF9 252 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 MRGPRX3Q96LB0 322 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 SLC12A9Q9BXP2 914 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 MBNL3Q9NUK0 354 aaKnown RBP7.16□□□□□ -1.26
UBR1-203ENST00000562173 GGA3Q9NZ52 723 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 SLAMF8Q9P0V8 285 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 PCDHAC2Q9Y5I4 1007 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 AOX1Q06278 1338 aa7.16□□□□□ -1.26
UBR1-203ENST00000562173 COL6A3P12111 3177 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 RBAK-RBAKDNI3L0D1 243 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 RNASE1P07998 156 aaKnown RBP7.15□□□□□ -1.26
UBR1-203ENST00000562173 ALDH1B1P30837 517 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 GDNFP39905 211 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 NOGQ13253 232 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 RTP2Q5QGT7 225 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 EEF1DP3Q658K8 133 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 ZNF34Q8IZ26 560 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 ANKS4BQ8N8V4 417 aa7.15□□□□□ -1.26
UBR1-203ENST00000562173 PDZD8Q8NEN9 1154 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms