RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 STRIP1Q5VSL9 837 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 HHATQ5VTY9 493 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 IFT20Q8IY31 132 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 LARGE2Q8N3Y3 721 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 TBC1D5Q92609 795 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 P3H4Q92791 437 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 PURBQ96QR8 312 aaKnown RBP14.53□□□□□ -0.08
CLK3-206ENST00000562078 PRDM16Q9HAZ2 1276 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 ARHGEF10LQ9HCE6 1279 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 SLC12A4Q9UP95 1085 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 LUC7L2Q9Y383 392 aaKnown RBP14.53□□□□□ -0.08
CLK3-206ENST00000562078 PSME4Q14997 1843 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 SPDYE5A6NIY4 337 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 HEXIM1O94992 359 aaKnown RBP14.53□□□□□ -0.08
CLK3-206ENST00000562078 GOLGA8HP0CJ92 632 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 ERICH1Q86X53 443 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 EPSTI1Q96J88 318 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 DNAJC7Q99615 494 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 GDF3Q9NR23 364 aa14.53□□□□□ -0.08
CLK3-206ENST00000562078 A0A087X0B3 334 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 GOLGA6L10A6NI86 522 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 LRRC10BA6NIK2 292 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 NCK2O43639 380 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 CYTH3O43739 400 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 BMP15O95972 392 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 TUBP50607 506 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 KCNJ2P63252 427 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 PTGDRQ13258 359 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 FAM133BQ5BKY9 247 aaKnown RBP14.52□□□□□ -0.08
CLK3-206ENST00000562078 ANKRD20A2Q5SQ80 823 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 DACT2Q5SW24 774 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 ANKRD20A1Q5TYW2 823 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 ANKRD20A3Q5VUR7 823 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 TYW1BQ6NUM6 668 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 KIAA0825Q8IV33 1275 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 CPVLQ9H3G5 476 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 TAF1DQ9H5J8 278 aaPredicted RBP14.52□□□□□ -0.08
CLK3-206ENST00000562078 MLXIPQ9HAP2 919 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 BCS1LQ9Y276 419 aa14.52□□□□□ -0.08
CLK3-206ENST00000562078 FER1L6Q2WGJ9 1857 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 A8MUI8 341 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 KCNJ18B7U540 433 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 EVI5O60447 810 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 DRD4P21917 467 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 CALML3P27482 149 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 GNAQP50148 359 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 KCNJ12Q14500 433 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 PDIA5Q14554 519 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 ODF2Q5BJF6 829 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 MTHFD1LQ6UB35 978 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 ZNF662Q6ZS27 426 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 ARHGAP22Q7Z5H3 698 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 GALNT15Q8N3T1 639 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 MREGQ8N565 214 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 C1orf131Q8NDD1 294 aaKnown RBP14.52□□□□□ -0.09
CLK3-206ENST00000562078 RASGRP4Q8TDF6 673 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 SYMPKQ92797 1274 aaKnown RBP14.52□□□□□ -0.09
CLK3-206ENST00000562078 FERMT2Q96AC1 680 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 CEP95Q96GE4 821 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 MS4A14Q96JA4 679 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 LRWD1Q9UFC0 647 aa14.52□□□□□ -0.09
CLK3-206ENST00000562078 GCOM1H8Y6P7 765 aaPredicted RBP14.51□□□□□ -0.09
CLK3-206ENST00000562078 ECEL1O95672 775 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 MYZAPP0CAP1 466 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 MCM7P33993 719 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 ATP2C1P98194 919 aaPredicted RBP14.51□□□□□ -0.09
CLK3-206ENST00000562078 ZNF268Q14587 947 aaPredicted RBP14.51□□□□□ -0.09
CLK3-206ENST00000562078 TCP11X2Q5H9J9 407 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 TRIM68Q6AZZ1 485 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 HEATR3Q7Z4Q2 680 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 BLIDQ8IZY5 108 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 NEDD1Q8NHV4 660 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 FAM81AQ8TBF8 368 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 TEKT1Q969V4 418 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 NHEJ1Q9H9Q4 299 aaPredicted RBP14.51□□□□□ -0.09
CLK3-206ENST00000562078 KCNMB3Q9NPA1 279 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 PICK1Q9NRD5 415 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 AGAP1Q9UPQ3 857 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 PALM3A6NDB9 673 aaPredicted RBP14.51□□□□□ -0.09
CLK3-206ENST00000562078 DCDC2CA8MYV0 355 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 MOCS3O95396 460 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 KIF5AQ12840 1032 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
CLK3-206ENST00000562078 TSR1Q2NL82 804 aaKnown RBP14.51□□□□□ -0.09
CLK3-206ENST00000562078 KANK3Q6NY19 840 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 KRT26Q7Z3Y9 468 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 NCAPG2Q86XI2 1143 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 KCNV2Q8TDN2 545 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 CASKIN2Q8WXE0 1202 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 STAMQ92783 540 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 GORASP1Q9BQQ3 440 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 SH3GLB2Q9NR46 395 aa14.51□□□□□ -0.09
CLK3-206ENST00000562078 YDJCA8MPS7 323 aa14.5□□□□□ -0.09
CLK3-206ENST00000562078 ALADP13716 330 aa14.5□□□□□ -0.09
CLK3-206ENST00000562078 FKBP1AP62942 108 aaKnown RBP14.5□□□□□ -0.09
CLK3-206ENST00000562078 CCDC96Q2M329 555 aa14.5□□□□□ -0.09
CLK3-206ENST00000562078 TEKT4Q8WW24 435 aa14.5□□□□□ -0.09
CLK3-206ENST00000562078 DDX4Q9NQI0 724 aaKnown RBP14.5□□□□□ -0.09
CLK3-206ENST00000562078 AGPAT5Q9NUQ2 364 aa14.5□□□□□ -0.09
CLK3-206ENST00000562078 PCDHA4Q9UN74 947 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms