RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 ZNF541Q9H0D2 1346 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 SFI1A8K8P3 1242 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 ZNF263O14978 683 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 ZBED4O75132 1171 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 NR3C1P04150 777 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 RPL13P26373 211 aaKnown RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 EIF4A3P38919 411 aaKnown RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 EPS15P42566 896 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 KIF11P52732 1056 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 AMPD2Q01433 879 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 CYP27A1Q02318 531 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 KCNH2Q12809 1159 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 TKFCQ3LXA3 575 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 MIER3Q7Z3K6 550 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 SCYL3Q8IZE3 742 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 RABGGTAQ92696 567 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 TSGA10Q9BZW7 698 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 LACRTQ9GZZ8 138 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 HOMER2Q9NSB8 354 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 SEL1LQ9UBV2 794 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 ARMCX3Q9UH62 379 aaPredicted RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 ZNF112Q9UJU3 913 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 ODF2LQ9ULJ1 636 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 CTDP1Q9Y5B0 961 aaPredicted RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 PHIPQ8WWQ0 1821 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 ZMYM2Q9UBW7 1377 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 RLFQ13129 1914 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 DDX39AO00148 427 aaKnown RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 SLC16A3O15427 465 aaKnown RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 FDX1P10109 184 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 CLCN6P51797 869 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 ZNF131P52739 623 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 CHMP4BP1P59074 171 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 SPP2Q13103 211 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 WHAMMP3Q1A5X7 153 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 GPR161Q8N6U8 529 aaKnown RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 BANK1Q8NDB2 785 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 FBXO41Q8TF61 875 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 SYN2Q92777 582 aaPredicted RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 PURBQ96QR8 312 aaKnown RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 DEF6Q9H4E7 631 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 AS3MTQ9HBK9 375 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 AGO4Q9HCK5 861 aaKnown RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 NLRC4Q9NPP4 1024 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 JADE2Q9NQC1 790 aa10.8□□□□□ -0.68
SMG1-205ENST00000561947 ARGLU1Q9NWB6 273 aaPredicted RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 DDX41Q9UJV9 622 aaKnown RBP10.8□□□□□ -0.68
SMG1-205ENST00000561947 SSU72P8A0A1W2PR75 194 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 DHX15O43143 795 aaKnown RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 GUCY2CP25092 1073 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 NMT1P30419 496 aaKnown RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 BACE1P56817 501 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 MRPS9P82933 396 aaKnown RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 KIF5AQ12840 1032 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 MAPK8IP2Q13387 824 aaPredicted RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 APOBEC3FQ8IUX4 373 aaKnown RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 TAAR1Q96RJ0 339 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 CRACR2AQ9BSW2 395 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 GANQ9H2C0 597 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 METTL14Q9HCE5 456 aaKnown RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 PKD2L1Q9P0L9 805 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 MYO6Q9UM54 1294 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 PCDHA13Q9Y5I0 950 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 ARHGEF35A5YM69 484 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 TGFB1I1O43294 461 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 AKR1B10O60218 316 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 AKAP3O75969 853 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 AFPP02771 609 aaKnown RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 EPB41P11171 864 aaKnown RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 POLR2FP61218 127 aaKnown RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 RPS6P62753 249 aaKnown RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 KCNA1Q09470 495 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 ITGB3BPQ13352 177 aaPredicted RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 R3HDM1Q15032 1099 aaKnown RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 NFIL3Q16649 462 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 SFMBT2Q5VUG0 894 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 HGSNATQ68CP4 663 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 TRAPPC11Q7Z392 1133 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 TRERF1Q96PN7 1200 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 FIZ1Q96SL8 496 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 IFIH1Q9BYX4 1025 aaKnown RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 OGFRQ9NZT2 677 aa10.79□□□□□ -0.68
SMG1-205ENST00000561947 PUF60Q9UHX1 559 aaKnown RBP10.79□□□□□ -0.68
SMG1-205ENST00000561947 VWA5AO00534 786 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 USO1O60763 962 aaKnown RBP10.78□□□□□ -0.68
SMG1-205ENST00000561947 P4HBP07237 508 aaKnown RBP10.78□□□□□ -0.68
SMG1-205ENST00000561947 XRCC5P13010 732 aaKnown RBP10.78□□□□□ -0.68
SMG1-205ENST00000561947 PTPRAP18433 802 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 EIF2AK2P19525 551 aaKnown RBP10.78□□□□□ -0.68
SMG1-205ENST00000561947 MTMR1Q13613 665 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 PGM5Q15124 567 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 ASTE1Q2TB18 679 aaPredicted RBP10.78□□□□□ -0.68
SMG1-205ENST00000561947 ANGEL2Q5VTE6 544 aaKnown RBP10.78□□□□□ -0.68
SMG1-205ENST00000561947 STXBP4Q6ZWJ1 553 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 ZNF280CQ8ND82 737 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 ATG4CQ96DT6 458 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 WRNIP1Q96S55 665 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 ZSWIM4Q9H7M6 989 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 PICK1Q9NRD5 415 aa10.78□□□□□ -0.68
SMG1-205ENST00000561947 ZNF446Q9NWS9 450 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms