RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 MTUS1Q9ULD2 1270 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 TPCN1Q9ULQ1 816 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 PCDHA4Q9UN74 947 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 CDY2AQ9Y6F7 541 aa19.52■□□□□ 0.72
CDC42BPB-208ENST00000561271 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 EDIL3O43854 480 aa19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 CIITAP33076 1130 aa19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 ANAPC15P60006 121 aa19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 MRPS6P82932 125 aaKnown RBP19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 TMEM62Q0P6H9 643 aa19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 LPIN1Q14693 890 aa19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 KRT40Q6A162 431 aa19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 MIS18BP1Q6P0N0 1132 aa19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 APBB2Q92870 758 aa19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 COL25A1Q9BXS0 654 aaPredicted RBP19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 ZNF302Q9NR11 478 aa19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 PLXNA4Q9HCM2 1894 aa19.51■□□□□ 0.71
CDC42BPB-208ENST00000561271 LINC01553A4QN01 128 aa19.5■□□□□ 0.71
CDC42BPB-208ENST00000561271 SLC26A2P50443 739 aa19.5■□□□□ 0.71
CDC42BPB-208ENST00000561271 AK2P54819 239 aa19.5■□□□□ 0.71
CDC42BPB-208ENST00000561271 NPY5RQ15761 445 aa19.5■□□□□ 0.71
CDC42BPB-208ENST00000561271 ZNF746Q6NUN9 644 aaPredicted RBP19.5■□□□□ 0.71
CDC42BPB-208ENST00000561271 PDXDC2PQ6P474 469 aa19.5■□□□□ 0.71
CDC42BPB-208ENST00000561271 TBCKQ8TEA7 893 aa19.5■□□□□ 0.71
CDC42BPB-208ENST00000561271 ATP8B4Q8TF62 1192 aa19.5■□□□□ 0.71
CDC42BPB-208ENST00000561271 GDPD5Q8WTR4 605 aa19.5■□□□□ 0.71
CDC42BPB-208ENST00000561271 SLKQ9H2G2 1235 aaPredicted RBP19.5■□□□□ 0.71
CDC42BPB-208ENST00000561271 TBC1D22BQ9NU19 505 aa19.5■□□□□ 0.71
CDC42BPB-208ENST00000561271 TCEAL9Q9UHQ7 104 aa19.5■□□□□ 0.71
CDC42BPB-208ENST00000561271 UPP2O95045 317 aa19.49■□□□□ 0.71
CDC42BPB-208ENST00000561271 KRT76Q01546 638 aa19.49■□□□□ 0.71
CDC42BPB-208ENST00000561271 GRB10Q13322 594 aa19.49■□□□□ 0.71
CDC42BPB-208ENST00000561271 FBXO47Q5MNV8 452 aa19.49■□□□□ 0.71
CDC42BPB-208ENST00000561271 SWSAP1Q6NVH7 229 aa19.49■□□□□ 0.71
CDC42BPB-208ENST00000561271 BLIDQ8IZY5 108 aa19.49■□□□□ 0.71
CDC42BPB-208ENST00000561271 DAGLBQ8NCG7 672 aa19.49■□□□□ 0.71
CDC42BPB-208ENST00000561271 TNPO1Q92973 898 aaKnown RBP19.49■□□□□ 0.71
CDC42BPB-208ENST00000561271 KCNJ14Q9UNX9 436 aa19.49■□□□□ 0.71
CDC42BPB-208ENST00000561271 PCDHA2Q9Y5H9 948 aa19.49■□□□□ 0.71
CDC42BPB-208ENST00000561271 STK36Q9NRP7 1315 aa19.49■□□□□ 0.71
CDC42BPB-208ENST00000561271 IGSF9BQ9UPX0 1349 aa19.49■□□□□ 0.71
CDC42BPB-208ENST00000561271 COL1A2P08123 1366 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 M0R2N6 131 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 MSH4O15457 936 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 GTPBP6O43824 516 aaPredicted RBP19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 PFKFB2O60825 505 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 CDKL5O76039 1030 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 ATP4AP20648 1035 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 HTRA4P83105 476 aaPredicted RBP19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 MTHFD1LQ6UB35 978 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 TRMT1LQ7Z2T5 733 aaKnown RBP19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 CKAP2LQ8IYA6 745 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 SMAP1Q8IYB5 467 aaPredicted RBP19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 GJA10Q969M2 543 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 THEGQ9P2T0 379 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 INSL6Q9Y581 213 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 TRPV2Q9Y5S1 764 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 MTCH2Q9Y6C9 303 aa19.48■□□□□ 0.71
CDC42BPB-208ENST00000561271 ZBTB42B2RXF5 422 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 M0QZ92 97 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 CHMP2AO43633 222 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 HBP1O60381 514 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 LPXNO60711 386 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 LARGE1O95461 756 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 TDP2O95551 362 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 RPLP2P05387 115 aaKnown RBP19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 CD52P31358 61 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 USP11P51784 963 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 TSHZ1Q6ZSZ6 1077 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 TGS1Q96RS0 853 aaKnown RBP19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 YME1L1Q96TA2 773 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 AGO3Q9H9G7 860 aaKnown RBP19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 GABBR1Q9UBS5 961 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 SAMM50Q9Y512 469 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 PCDHA10Q9Y5I2 948 aa19.47■□□□□ 0.71
CDC42BPB-208ENST00000561271 SMIM35A0A1B0GVV1 85 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 WDR64B1ANS9 1081 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 GAS7O60861 476 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 CTDNEP1O95476 244 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 PSAPP07602 524 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 KLRC1P26715 233 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 ERVK-21P61565 698 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 IER5Q5VY09 327 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 SP7Q8TDD2 431 aaPredicted RBP19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 LINC01599Q8WXQ3 324 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 SLC5A5Q92911 643 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 TOP1MTQ969P6 601 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 C17orf80Q9BSJ5 609 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 C22orf23Q9BZE7 217 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 GJB4Q9NTQ9 266 aa19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 MAFBQ9Y5Q3 323 aaPredicted RBP19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 SPTBN5Q9NRC6 3674 aaKnown RBP19.46■□□□□ 0.71
CDC42BPB-208ENST00000561271 SEC24BO95487 1268 aa19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 POU3F3P20264 500 aaPredicted RBP19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 ANKRD1Q15327 319 aa19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 INF2Q27J81 1249 aa19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 ZNF484Q5JVG2 852 aa19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 LRCH2Q5VUJ6 765 aa19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 GALNT17Q6IS24 598 aa19.45■□□□□ 0.7
CDC42BPB-208ENST00000561271 FAM177A1Q8N128 213 aaPredicted RBP19.45■□□□□ 0.7
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