RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 HAUS2Q9NVX0 235 aa15.28■□□□□ 0.04
RABGGTA-220ENST00000560998 DDX25Q9UHL0 483 aaKnown RBP15.28■□□□□ 0.04
RABGGTA-220ENST00000560998 BICDL2A1A5D9 508 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 MYMKA6NI61 221 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 PAEPP09466 180 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 FCER1AP12319 257 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 GCKP35557 465 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 SCTRP47872 440 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 CCNHP51946 323 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 RIPK1Q13546 671 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 TMEM119Q4V9L6 283 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 CNNM4Q6P4Q7 775 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 TMEM179Q6ZVK1 233 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 CACNA2D3Q8IZS8 1091 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 ZNF507Q8TCN5 953 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 CDK5RAP3Q96JB5 506 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 OSBPL7Q9BZF2 842 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 GLT8D2Q9H1C3 349 aa15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 NHEJ1Q9H9Q4 299 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 MAGEC2Q9UBF1 373 aaPredicted RBP15.27■□□□□ 0.04
RABGGTA-220ENST00000560998 LIN7AO14910 233 aaPredicted RBP15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 TRAPPC3O43617 180 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 SSR1P43307 286 aaKnown RBP15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 DNM2P50570 870 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 SEC24CP53992 1094 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 ZBED6P86452 979 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 SPA17Q15506 151 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 CDCA2Q69YH5 1023 aaPredicted RBP15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 ANKRD40Q6AI12 368 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 CSGALNACT2Q8N6G5 542 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 KIAA0895Q8NCT3 520 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 SNX29Q8TEQ0 813 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 TCP11Q8WWU5 503 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 LARP4BQ92615 738 aaKnown RBP15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 RAD54LQ92698 747 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 HAS1Q92839 578 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 NUDT12Q9BQG2 462 aa15.27■□□□□ 0.03
RABGGTA-220ENST00000560998 ATRNL1Q5VV63 1379 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 PVALEFA0A1B0GWK0 134 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 RAD21O60216 631 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 ATP6V1G2O95670 118 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 GSTA1P08263 222 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 BIRC3Q13489 604 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 CDC37Q16543 378 aaPredicted RBP15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 KRT79Q5XKE5 535 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 UNC13DQ70J99 1090 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 NAP1L4Q99733 375 aaKnown RBP15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 TTYH3Q9C0H2 523 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 SH2D4AQ9H788 454 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 TDRD3Q9H7E2 651 aaKnown RBP15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 TMBIM4Q9HC24 238 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 ETAA1Q9NY74 926 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 PCDHA1Q9Y5I3 950 aa15.26■□□□□ 0.03
RABGGTA-220ENST00000560998 A0A1W2PQJ5 194 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 RCCD1A6NED2 376 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 DNM1LO00429 736 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 ENTPD3O75355 529 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 GDF11O95390 407 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 RXRBP28702 533 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 RWDD2BP57060 319 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 ABCB5Q2M3G0 1257 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 FIGNQ5HY92 759 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 CC2D2BQ6DHV5 1058 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 GMCL1P1Q8NEA9 526 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 PIK3R5Q8WYR1 880 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 HPS3Q969F9 1004 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 PLCB1Q9NQ66 1216 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 PSME4Q14997 1843 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 COL2A1P02458 1487 aaPredicted RBP15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 MACROD2A1Z1Q3 448 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 YDJCA8MPS7 323 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 USP17L15C9J2P7 530 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 USP17L13C9JLJ4 530 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 USP17L11C9JVI0 530 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 USP17L18D6R9N7 530 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 USP17L22D6RA61 530 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 USP17L17D6RBQ6 530 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 USP17L19D6RCP7 530 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 USP17L20D6RJB6 530 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 HSPA9P38646 679 aaKnown RBP15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 INHBEP58166 350 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 SLC7A5Q01650 507 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 USP17L24Q0WX57 530 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 SLC15A2Q16348 729 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 USP17L6PQ6QN14 398 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 KCNK18Q7Z418 384 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 FAM114A1Q8IWE2 563 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 SUPT20HQ8NEM7 779 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 TATDN2Q93075 761 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 GMCL1Q96IK5 515 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 SEC16BQ96JE7 1060 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 TUBGCP2Q9BSJ2 902 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 NOD2Q9HC29 1040 aa15.25■□□□□ 0.03
RABGGTA-220ENST00000560998 F5H6K3 240 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 BUB1BO60566 1050 aaPredicted RBP15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 KLRC3Q07444 240 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 RBBP5Q15291 538 aaKnown RBP15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 E2F5Q15329 346 aa15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 GKAP1Q5VSY0 366 aaPredicted RBP15.24■□□□□ 0.03
RABGGTA-220ENST00000560998 RUFY4Q6ZNE9 571 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms