RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 APOL5Q9BWW9 433 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 FTHL17Q9BXU8 183 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 RIOX1Q9H6W3 641 aa11.44□□□□□ -0.58
TPM1-225ENST00000560679 ATP9AO75110 1047 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 FGF18O76093 207 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 ARP10275 920 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 IGBP1P78318 339 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 APOBRQ0VD83 1088 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 PAK2Q13177 524 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 GRM4Q14833 912 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 ANKRD45Q5TZF3 282 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 PCNX4Q63HM2 1172 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 ANKRD54Q6NXT1 300 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 CYB5R4Q7L1T6 521 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 ZBTB33Q86T24 672 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 UBAC1Q9BSL1 405 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 TSHZ2Q9NRE2 1034 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 ERAP1Q9NZ08 941 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 TRPV2Q9Y5S1 764 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 SQORQ9Y6N5 450 aa11.43□□□□□ -0.58
TPM1-225ENST00000560679 PNMA6FA0A0J9YX94 578 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 FSD2A1L4K1 749 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 C2CD4DB7Z1M9 353 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 STAG3L1P0CL83 205 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 SDSP20132 328 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 IBSPP21815 317 aaPredicted RBP11.42□□□□□ -0.58
TPM1-225ENST00000560679 TECP42680 631 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 ID4P47928 161 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 SARSP49591 514 aaKnown RBP11.42□□□□□ -0.58
TPM1-225ENST00000560679 MFAP1P55081 439 aaKnown RBP11.42□□□□□ -0.58
TPM1-225ENST00000560679 MTMR3Q13615 1198 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 TMEM266Q2M3C6 531 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 PLPP4Q5VZY2 271 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 LLGL2Q6P1M3 1020 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 COLGALT1Q8NBJ5 622 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 RASGRP4Q8TDF6 673 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 TRAPPC12Q8WVT3 735 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 PCYT2Q99447 389 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 POMKQ9H5K3 350 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 SENP2Q9HC62 589 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 SORCS3Q9UPU3 1222 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 DENND4AQ7Z401 1863 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 NCOR2Q9Y618 2525 aa11.42□□□□□ -0.58
TPM1-225ENST00000560679 KDM3AQ9Y4C1 1321 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 MYO10Q9HD67 2058 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 TBKBP1A7MCY6 615 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 HIDE1A8MVS5 230 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 MEIS2O14770 477 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 INSRRP14616 1297 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 ITGB5P18084 799 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 FAM102BQ5T8I3 360 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 CWF19L1Q69YN2 538 aaKnown RBP11.41□□□□□ -0.58
TPM1-225ENST00000560679 USP17L6PQ6QN14 398 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 UBALD2Q8IYN6 164 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 ADSSL1Q8N142 457 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 MICAL1Q8TDZ2 1067 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 SEPT1Q8WYJ6 367 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 RILPL2Q969X0 211 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 GPRASP2Q96D09 838 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 DSCC1Q9BVC3 393 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 KRT23Q9C075 422 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 CWH43Q9H720 699 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 ERVK-5Q9HDB9 667 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 PCDHB12Q9Y5F1 795 aa11.41□□□□□ -0.58
TPM1-225ENST00000560679 RRN3P2A6NIE6 340 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 TROAPQ12815 778 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 TRAF1Q13077 416 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 IMMTQ16891 758 aaKnown RBP11.4□□□□□ -0.58
TPM1-225ENST00000560679 IER5Q5VY09 327 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 ASTLQ6HA08 431 aaPredicted RBP11.4□□□□□ -0.58
TPM1-225ENST00000560679 XRRA1Q6P2D8 792 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 CWC27Q6UX04 472 aaKnown RBP11.4□□□□□ -0.58
TPM1-225ENST00000560679 NLRX1Q86UT6 975 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 THNSL1Q8IYQ7 743 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 GIMAP8Q8ND71 665 aaPredicted RBP11.4□□□□□ -0.58
TPM1-225ENST00000560679 TMEM40Q8WWA1 233 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 PIBF1Q8WXW3 757 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 GLG1Q92896 1179 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 NKD2Q969F2 451 aaPredicted RBP11.4□□□□□ -0.58
TPM1-225ENST00000560679 TCF25Q9BQ70 676 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 CELF4Q9BZC1 486 aaKnown RBP11.4□□□□□ -0.58
TPM1-225ENST00000560679 IL25Q9H293 177 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 CNNM2Q9H8M5 875 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 TMEM260Q9NX78 707 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 PKD2L1Q9P0L9 805 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 LRFN2Q9ULH4 789 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 LZTS1Q9Y250 596 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 NR2E1Q9Y466 385 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 EP300Q09472 2414 aaPredicted RBP11.4□□□□□ -0.58
TPM1-225ENST00000560679 EPG5Q9HCE0 2579 aa11.4□□□□□ -0.58
TPM1-225ENST00000560679 KMT2BQ9UMN6 2715 aaPredicted RBP11.4□□□□□ -0.58
TPM1-225ENST00000560679 MED19A0JLT2 244 aaPredicted RBP11.39□□□□□ -0.59
TPM1-225ENST00000560679 C9IYK1 514 aa11.39□□□□□ -0.59
TPM1-225ENST00000560679 PIK3CDO00329 1044 aa11.39□□□□□ -0.59
TPM1-225ENST00000560679 RPLP2P05387 115 aaKnown RBP11.39□□□□□ -0.59
TPM1-225ENST00000560679 ASGR2P07307 311 aa11.39□□□□□ -0.59
TPM1-225ENST00000560679 SRGAP2BP0DMP2 458 aa11.39□□□□□ -0.59
TPM1-225ENST00000560679 FGFR1P11362 822 aa11.39□□□□□ -0.59
TPM1-225ENST00000560679 SPOUT1Q5T280 376 aaKnown RBP11.39□□□□□ -0.59
TPM1-225ENST00000560679 PDE12Q6L8Q7 609 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms