RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 KIF5BP33176 963 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 PRKCIP41743 596 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 SSR1P43307 286 aaKnown RBP17.48■□□□□ 0.39
PBX1-219ENST00000560641 PTENP60484 403 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 NLRP10Q86W26 655 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 TPCN2Q8NHX9 752 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 ECT2Q9H8V3 914 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 LRRC4CQ9HCJ2 640 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 RTN3O95197 1032 aaPredicted RBP17.48■□□□□ 0.39
PBX1-219ENST00000560641 OR52Z1P0C646 297 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 ATP4AP20648 1035 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 IBSPP21815 317 aaPredicted RBP17.48■□□□□ 0.39
PBX1-219ENST00000560641 MSH2P43246 934 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 KLRC3Q07444 240 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 TXNRD1Q16881 649 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 PARP6Q2NL67 630 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 DPY19L2P1Q6NXN4 242 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 SLC30A9Q6PML9 568 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 SYCE1Q8N0S2 351 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 COL4A3BPQ9Y5P4 624 aa17.48■□□□□ 0.39
PBX1-219ENST00000560641 KRIT1O00522 736 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 ATP2C2O75185 946 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 MRPS35P82673 323 aaKnown RBP17.47■□□□□ 0.39
PBX1-219ENST00000560641 DIXDC1Q155Q3 683 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 NEK9Q8TD19 979 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 RXFP1Q9HBX9 757 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 PCDH11XQ9BZA7 1347 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 PCDH11YQ9BZA8 1340 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 CCDC194A0A1B0GVG4 234 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 IGF2BP3O00425 579 aaKnown RBP eCLIP17.47■□□□□ 0.39
PBX1-219ENST00000560641 CEP104O60308 925 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 PDE8AO60658 829 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 ACVR2BQ13705 512 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 MTHFD1LQ6UB35 978 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 NAF1Q96HR8 494 aaKnown RBP17.47■□□□□ 0.39
PBX1-219ENST00000560641 INTS9Q9NV88 658 aaKnown RBP17.47■□□□□ 0.39
PBX1-219ENST00000560641 RPL26L1Q9UNX3 145 aaKnown RBP17.47■□□□□ 0.39
PBX1-219ENST00000560641 CNGA2Q16280 664 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 KIF6Q6ZMV9 814 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 GALNT15Q8N3T1 639 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 TSG101Q99816 390 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 PACSIN1Q9BY11 444 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 LRRC27Q9C0I9 530 aa17.47■□□□□ 0.39
PBX1-219ENST00000560641 DDX47Q9H0S4 455 aaKnown RBP17.47■□□□□ 0.39
PBX1-219ENST00000560641 PMS2P54278 862 aa17.46■□□□□ 0.39
PBX1-219ENST00000560641 DHX34Q14147 1143 aaKnown RBP17.46■□□□□ 0.39
PBX1-219ENST00000560641 ERICH1Q86X53 443 aa17.46■□□□□ 0.39
PBX1-219ENST00000560641 TRIM59Q8IWR1 403 aa17.46■□□□□ 0.39
PBX1-219ENST00000560641 DRAXINQ8NBI3 349 aaPredicted RBP17.46■□□□□ 0.39
PBX1-219ENST00000560641 ZMYND12Q9H0C1 365 aa17.46■□□□□ 0.39
PBX1-219ENST00000560641 BAG3O95817 575 aa17.46■□□□□ 0.39
PBX1-219ENST00000560641 KRT16P08779 473 aa17.46■□□□□ 0.39
PBX1-219ENST00000560641 CNGA1P29973 690 aa17.46■□□□□ 0.39
PBX1-219ENST00000560641 MKRN3Q13064 507 aaKnown RBP17.46■□□□□ 0.39
PBX1-219ENST00000560641 APBB1IPQ7Z5R6 666 aaPredicted RBP17.46■□□□□ 0.39
PBX1-219ENST00000560641 ELAC2Q9BQ52 826 aaKnown RBP17.46■□□□□ 0.39
PBX1-219ENST00000560641 BLOC1S4Q9NUP1 217 aa17.46■□□□□ 0.39
PBX1-219ENST00000560641 AMACRQ9UHK6 382 aa17.46■□□□□ 0.39
PBX1-219ENST00000560641 PDLIM1O00151 329 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 TTI1O43156 1089 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 PAPOLAP51003 745 aaKnown RBP17.45■□□□□ 0.38
PBX1-219ENST00000560641 LACTBP83111 547 aaPredicted RBP17.45■□□□□ 0.38
PBX1-219ENST00000560641 FKBP3Q00688 224 aaKnown RBP17.45■□□□□ 0.38
PBX1-219ENST00000560641 ASIC2Q16515 512 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 ZNF568Q3ZCX4 644 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 RNF43Q68DV7 783 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 IRF2BP2Q7Z5L9 587 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 ENDOVQ8N8Q3 282 aaKnown RBP17.45■□□□□ 0.38
PBX1-219ENST00000560641 MAGEB6P1A0A0J9YX57 407 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 GFPT2O94808 682 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 SUN1O94901 812 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 VEGFAP15692 232 aaPredicted RBP17.45■□□□□ 0.38
PBX1-219ENST00000560641 ATP11AP98196 1134 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 KLHL30Q0D2K2 578 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 SV2BQ7L1I2 683 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 NT5DC3Q86UY8 548 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 EEF2KMTQ96G04 330 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 ERP44Q9BS26 406 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 ROPN1BQ9BZX4 212 aaPredicted RBP17.45■□□□□ 0.38
PBX1-219ENST00000560641 ROPN1Q9HAT0 212 aaPredicted RBP17.45■□□□□ 0.38
PBX1-219ENST00000560641 POTEFA5A3E0 1075 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 POTEIP0CG38 1075 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 POTEJP0CG39 1038 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 FAM133BQ5BKY9 247 aaKnown RBP17.45■□□□□ 0.38
PBX1-219ENST00000560641 POTEEQ6S8J3 1075 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 ZNF804BA4D1E1 1349 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 C10orf71Q711Q0 1435 aa17.45■□□□□ 0.38
PBX1-219ENST00000560641 IRF6O14896 467 aa17.44■□□□□ 0.38
PBX1-219ENST00000560641 PDE6BP35913 854 aa17.44■□□□□ 0.38
PBX1-219ENST00000560641 SPDYAQ5MJ70 313 aa17.44■□□□□ 0.38
PBX1-219ENST00000560641 TAOK1Q7L7X3 1001 aa17.44■□□□□ 0.38
PBX1-219ENST00000560641 ADGRA1Q86SQ6 560 aa17.44■□□□□ 0.38
PBX1-219ENST00000560641 RNF25Q96BH1 459 aaPredicted RBP17.44■□□□□ 0.38
PBX1-219ENST00000560641 ZBTB10Q96DT7 871 aa17.44■□□□□ 0.38
PBX1-219ENST00000560641 TMEM237Q96Q45 408 aa17.44■□□□□ 0.38
PBX1-219ENST00000560641 RAB3IPQ96QF0 476 aaPredicted RBP17.44■□□□□ 0.38
PBX1-219ENST00000560641 PRMT1Q99873 361 aaKnown RBP17.44■□□□□ 0.38
PBX1-219ENST00000560641 LSM14BQ9BX40 385 aaKnown RBP17.44■□□□□ 0.38
PBX1-219ENST00000560641 ARL2BPQ9Y2Y0 163 aa17.44■□□□□ 0.38
PBX1-219ENST00000560641 SHBGP04278 402 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms