RNA–Protein interactions for RNA: ENST00000559858.5

ZEB1-217, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 2,745 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-217ENST00000559858 NPY5RQ15761 445 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 WASHC2DQ5SRD0 308 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 C10orf76Q5T2E6 689 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 C1QTNF12Q5T7M4 302 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 DTHD1Q6ZMT9 781 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 PIK3AP1Q6ZUJ8 805 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 C14orf37Q86TY3 774 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 RASGEF1CQ8N431 466 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 METTL13Q8N6R0 699 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 C4orf32Q8N8J7 132 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 CFAP61Q8NHU2 1237 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 OPTNQ96CV9 577 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 NUDCD1Q96RS6 583 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 CCSER1Q9C0I3 900 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 VCX3BQ9H321 246 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 VCX3AQ9NNX9 186 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 FGFR1OP2Q9NVK5 253 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 CEP72Q9P209 647 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 ATXN10Q9UBB4 475 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 PRKAG3Q9UGI9 489 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 PHF24Q9UPV7 400 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 PCDHGA4Q9Y5G9 962 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 USP54Q70EL1 1684 aa7.22□□□□□ -1.25
ZEB1-217ENST00000559858 SIPA1L3O60292 1781 aaPredicted RBP7.22□□□□□ -1.25
ZEB1-217ENST00000559858 MARF1Q9Y4F3 1742 aaKnown RBP7.22□□□□□ -1.25
ZEB1-217ENST00000559858 hCG_1642624A0A1W2PR95 340 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 NKRFO15226 690 aaKnown RBP eCLIP7.21□□□□□ -1.254e-7■■■□□ 16
ZEB1-217ENST00000559858 PENKP01210 267 aaPredicted RBP7.21□□□□□ -1.25
ZEB1-217ENST00000559858 LMNAP02545 664 aaKnown RBP7.21□□□□□ -1.25
ZEB1-217ENST00000559858 STK4Q13043 487 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 PPP2R5EQ16537 467 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 MUM1Q2TAK8 710 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 RNF43Q68DV7 783 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 CENPPQ6IPU0 288 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 LONP2Q86WA8 852 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 ARHGAP18Q8N392 663 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 SLC17A8Q8NDX2 589 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 UTP4Q969X6 686 aaKnown RBP7.21□□□□□ -1.25
ZEB1-217ENST00000559858 RNF25Q96BH1 459 aaPredicted RBP7.21□□□□□ -1.25
ZEB1-217ENST00000559858 FAM136AQ96C01 138 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 ZNF496Q96IT1 587 aaPredicted RBP7.21□□□□□ -1.25
ZEB1-217ENST00000559858 ZNF512BQ96KM6 892 aaPredicted RBP7.21□□□□□ -1.25
ZEB1-217ENST00000559858 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.21□□□□□ -1.258e-6■■■■□ 22
ZEB1-217ENST00000559858 UBE2OQ9C0C9 1292 aaKnown RBP7.21□□□□□ -1.25
ZEB1-217ENST00000559858 EPB41L4BQ9H329 900 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 RNF41Q9H4P4 317 aaPredicted RBP7.21□□□□□ -1.25
ZEB1-217ENST00000559858 EPB41L4AQ9HCS5 686 aaPredicted RBP7.21□□□□□ -1.25
ZEB1-217ENST00000559858 GOPCQ9HD26 462 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 PIH1D3Q9NQM4 214 aaKnown RBP7.21□□□□□ -1.25
ZEB1-217ENST00000559858 DNAAF2Q9NVR5 837 aaKnown RBP7.21□□□□□ -1.25
ZEB1-217ENST00000559858 KLHL14Q9P2G3 628 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 ADAMTS13Q76LX8 1427 aa7.21□□□□□ -1.25
ZEB1-217ENST00000559858 SMIM23A6NLE4 172 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 TLR2O60603 784 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 ITGA4P13612 1032 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 TATP17735 454 aaPredicted RBP7.21□□□□□ -1.26
ZEB1-217ENST00000559858 PTDSS1P48651 473 aaKnown RBP7.21□□□□□ -1.26
ZEB1-217ENST00000559858 NLRP5P59047 1200 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 DPY19L2Q6NUT2 758 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 CNNM4Q6P4Q7 775 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 ANKRD23Q86SG2 305 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 NBPF15Q8N660 670 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 FBXO41Q8TF61 875 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 ATP8B4Q8TF62 1192 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 GBP5Q96PP8 586 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 TMEM237Q96Q45 408 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 NAP1L3Q99457 506 aaPredicted RBP7.21□□□□□ -1.26
ZEB1-217ENST00000559858 C7orf25Q9BPX7 421 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 LRMDAQ9H2I8 198 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 SEMA6BQ9H3T3 888 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 NLRC4Q9NPP4 1024 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 BLOC1S6Q9UL45 172 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 RPL26L1Q9UNX3 145 aaKnown RBP7.21□□□□□ -1.26
ZEB1-217ENST00000559858 LRCH1Q9Y2L9 728 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 SPATA31A3Q5VYP0 1347 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 ARFGEF2Q9Y6D5 1785 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 A0A087X0T9 212 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 TCRBV5S4A2TA0A5A2 114 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 NVLO15381 856 aaKnown RBP7.21□□□□□ -1.26
ZEB1-217ENST00000559858 PCCAP05165 728 aaPredicted RBP7.21□□□□□ -1.26
ZEB1-217ENST00000559858 FAM228BP0C875 321 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 SKIP12755 728 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 RXRBP28702 533 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 ASIC1P78348 528 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 AMPD3Q01432 767 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 MKRN3Q13064 507 aaKnown RBP7.21□□□□□ -1.26
ZEB1-217ENST00000559858 SLC29A2Q14542 456 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 ZRSR2Q15696 482 aaKnown RBP7.21□□□□□ -1.26
ZEB1-217ENST00000559858 DBN1Q16643 649 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 PABPC1LQ4VXU2 614 aaKnown RBP7.21□□□□□ -1.26
ZEB1-217ENST00000559858 TNFAIP8L3Q5GJ75 292 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 FAM83BQ5T0W9 1011 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 ACBD5Q5T8D3 534 aaPredicted RBP7.21□□□□□ -1.26
ZEB1-217ENST00000559858 DUPD1Q68J44 220 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 LCA5Q86VQ0 697 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 NLRP3Q96P20 1036 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 NDNQ99608 321 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 DDX23Q9BUQ8 820 aaKnown RBP7.21□□□□□ -1.26
ZEB1-217ENST00000559858 PACSIN1Q9BY11 444 aa7.21□□□□□ -1.26
ZEB1-217ENST00000559858 CELF4Q9BZC1 486 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms