RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 NCAPH2Q6IBW4 605 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 PDXDC2PQ6P474 469 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 BRAPQ7Z569 592 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 SLFN12Q8IYM2 578 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 LINC01465Q8N7H1 131 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 C7orf31Q8N865 590 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 ZNF579Q8NAF0 562 aaKnown RBP12.88□□□□□ -0.35
SNX1-204ENST00000559061 BADQ92934 168 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 GDF15Q99988 308 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 HSD17B14Q9BPX1 270 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 PPP1R12CQ9BZL4 782 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 TMEM39AQ9NV64 488 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 NOL7Q9UMY1 257 aaKnown RBP12.88□□□□□ -0.35
SNX1-204ENST00000559061 CLIC4Q9Y696 253 aa12.88□□□□□ -0.35
SNX1-204ENST00000559061 LAMA3Q16787 3333 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 POTEB3A0JP26 581 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 C17orf102A2RUQ5 167 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 PP2D1A8MPX8 630 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 BACH1O14867 736 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 ZBTB39O15060 712 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 MED24O75448 989 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 SLITRK3O94933 977 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 C22orf31O95567 290 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 TIMP1P01033 207 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 OATP04181 439 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 TECP42680 631 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 FXR2P51116 673 aaKnown RBP eCLIP12.87□□□□□ -0.35
SNX1-204ENST00000559061 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
SNX1-204ENST00000559061 EPHA7Q15375 998 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 TCTN1Q2MV58 587 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 FOXD4L5Q5VV16 416 aaPredicted RBP12.87□□□□□ -0.35
SNX1-204ENST00000559061 POTEBQ6S5H4 581 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 ANO5Q75V66 913 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 C16orf59Q7L2K0 433 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 IGSF22Q8N9C0 903 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 LRRC15Q8TF66 581 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 FOXD4L4Q8WXT5 416 aaPredicted RBP12.87□□□□□ -0.35
SNX1-204ENST00000559061 DYDC2Q96IM9 177 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 USP28Q96RU2 1077 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 SH2D3AQ9BRG2 576 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 MMTAG2Q9BU76 263 aaKnown RBP12.87□□□□□ -0.35
SNX1-204ENST00000559061 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 PCDHA12Q9UN75 941 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 NRCAMQ92823 1304 aa12.87□□□□□ -0.35
SNX1-204ENST00000559061 A0A087WWV3 80 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 BRD1O95696 1058 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 F13A1P00488 732 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 ZSCAN22P10073 491 aaPredicted RBP12.86□□□□□ -0.35
SNX1-204ENST00000559061 SLC26A2P50443 739 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 CYP4A11Q02928 519 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 PTK7Q13308 1070 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 CTTNQ14247 550 aaKnown RBP12.86□□□□□ -0.35
SNX1-204ENST00000559061 SF3A1Q15459 793 aaKnown RBP12.86□□□□□ -0.35
SNX1-204ENST00000559061 FAM160B1Q5W0V3 765 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 PLA2G4FQ68DD2 849 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 ATP6V0A1Q93050 837 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 SCLYQ96I15 445 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 EIF2AK1Q9BQI3 630 aaKnown RBP12.86□□□□□ -0.35
SNX1-204ENST00000559061 LXNQ9BS40 222 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 HIPK3Q9H422 1215 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 SAMM50Q9Y512 469 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 NR2E3Q9Y5X4 410 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 TCHHQ07283 1943 aa12.86□□□□□ -0.35
SNX1-204ENST00000559061 COL1A2P08123 1366 aa12.85□□□□□ -0.35
SNX1-204ENST00000559061 TLR3O15455 904 aaKnown RBP12.85□□□□□ -0.35
SNX1-204ENST00000559061 HBP1O60381 514 aa12.85□□□□□ -0.35
SNX1-204ENST00000559061 CKBP12277 381 aa12.85□□□□□ -0.35
SNX1-204ENST00000559061 PRPHP41219 470 aa12.85□□□□□ -0.35
SNX1-204ENST00000559061 CCL23P55773 120 aa12.85□□□□□ -0.35
SNX1-204ENST00000559061 PSMC5P62195 406 aa12.85□□□□□ -0.35
SNX1-204ENST00000559061 IGBP1P78318 339 aa12.85□□□□□ -0.35
SNX1-204ENST00000559061 MGAT3Q09327 533 aa12.85□□□□□ -0.35
SNX1-204ENST00000559061 MKRN4PQ13434 485 aaPredicted RBP12.85□□□□□ -0.35
SNX1-204ENST00000559061 DRP2Q13474 957 aa12.85□□□□□ -0.35
SNX1-204ENST00000559061 PRPF38BQ5VTL8 546 aaKnown RBP12.85□□□□□ -0.35
SNX1-204ENST00000559061 MTHFD1LQ6UB35 978 aa12.85□□□□□ -0.35
SNX1-204ENST00000559061 TRMT1LQ7Z2T5 733 aaKnown RBP12.85□□□□□ -0.35
SNX1-204ENST00000559061 BBXQ8WY36 941 aaPredicted RBP12.85□□□□□ -0.35
SNX1-204ENST00000559061 NIFKQ9BYG3 293 aaKnown RBP12.85□□□□□ -0.35
SNX1-204ENST00000559061 TUBE1Q9UJT0 475 aa12.85□□□□□ -0.35
SNX1-204ENST00000559061 PITPNM1O00562 1244 aa12.84□□□□□ -0.35
SNX1-204ENST00000559061 NBNO60934 754 aa12.84□□□□□ -0.35
SNX1-204ENST00000559061 LYPLA2O95372 231 aa12.84□□□□□ -0.35
SNX1-204ENST00000559061 BAG4O95429 457 aaKnown RBP12.84□□□□□ -0.35
SNX1-204ENST00000559061 P4HBP07237 508 aaKnown RBP12.84□□□□□ -0.35
SNX1-204ENST00000559061 IQCF3P0C7M6 154 aa12.84□□□□□ -0.35
SNX1-204ENST00000559061 CSF2RAP15509 400 aa12.84□□□□□ -0.35
SNX1-204ENST00000559061 CDC25AP30304 524 aa12.84□□□□□ -0.35
SNX1-204ENST00000559061 QARSP47897 775 aaKnown RBP12.84□□□□□ -0.35
SNX1-204ENST00000559061 NASPP49321 788 aaPredicted RBP12.84□□□□□ -0.35
SNX1-204ENST00000559061 NPEPPSP55786 919 aa12.84□□□□□ -0.35
SNX1-204ENST00000559061 ZNF618Q5T7W0 954 aa12.84□□□□□ -0.35
SNX1-204ENST00000559061 MFSD5Q6N075 450 aa12.84□□□□□ -0.35
SNX1-204ENST00000559061 CATSPER3Q86XQ3 398 aa12.84□□□□□ -0.35
SNX1-204ENST00000559061 C4orf19Q8IY42 314 aa12.84□□□□□ -0.35
SNX1-204ENST00000559061 FBXO2Q9UK22 296 aaPredicted RBP12.84□□□□□ -0.35
SNX1-204ENST00000559061 PCDHA2Q9Y5H9 948 aa12.84□□□□□ -0.35
SNX1-204ENST00000559061 LAMA2P24043 3122 aaKnown RBP12.84□□□□□ -0.35
SNX1-204ENST00000559061 IGKV6-21A0A0C4DH24 114 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms