RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 CDCA2Q69YH5 1023 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-207ENST00000558919 FSTL4Q6MZW2 842 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 CC2D1AQ6P1N0 951 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-207ENST00000558919 PKN3Q6P5Z2 889 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 KIAA0907Q7Z7F0 614 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-207ENST00000558919 MBD6Q96DN6 1003 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 TACO1Q9BSH4 297 aaKnown RBP5.42□□□□□ -1.54
VPS13C-207ENST00000558919 BARX1Q9HBU1 254 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-207ENST00000558919 INCENPQ9NQS7 918 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 B4GALT6Q9UBX8 382 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 PLAAQ9Y263 795 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 TBX22Q9Y458 520 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 ASB1Q9Y576 335 aa5.42□□□□□ -1.54
VPS13C-207ENST00000558919 TLDC2A0PJX2 215 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 H0Y858 1186 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 CBX4O00257 560 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 FOXP2O15409 715 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 POU3F2P20265 443 aaPredicted RBP5.41□□□□□ -1.54
VPS13C-207ENST00000558919 CNR2P34972 360 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 SURF1Q15526 300 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 UBXN11Q5T124 520 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 ERICH6BQ5W0A0 696 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 CXXC5Q7LFL8 322 aaKnown RBP5.41□□□□□ -1.54
VPS13C-207ENST00000558919 KIF18BQ86Y91 864 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 REXO1L1PQ8IX06 675 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 NIM1KQ8IY84 436 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 NUDT10Q8NFP7 164 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 ASB15Q8WXK1 588 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 DDX1Q92499 740 aaKnown RBP5.41□□□□□ -1.54
VPS13C-207ENST00000558919 NUDT11Q96G61 164 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 AJUBAQ96IF1 538 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 GBP4Q96PP9 640 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 ADAM29Q9UKF5 820 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 DUSP10Q9Y6W6 482 aa5.41□□□□□ -1.54
VPS13C-207ENST00000558919 PTPDC1A2A3K4 754 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 RASSF10A6NK89 507 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 PRICKLE3O43900 615 aaPredicted RBP5.4□□□□□ -1.54
VPS13C-207ENST00000558919 FOXD2O60548 495 aaPredicted RBP5.4□□□□□ -1.54
VPS13C-207ENST00000558919 MPIG6BO95866 241 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 MMEP08473 750 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 MC4RP32245 332 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 RANGAP1P46060 587 aaPredicted RBP5.4□□□□□ -1.54
VPS13C-207ENST00000558919 FNTBP49356 437 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 TMEM132BQ14DG7 1078 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 STILQ15468 1287 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 C21orf62-AS1Q17RA5 79 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 Q6ZUG5 572 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 PLEKHH3Q7Z736 793 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 FERMT3Q86UX7 667 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 LRRTM3Q86VH5 581 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 BTBD2Q9BX70 525 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 AMNQ9BXJ7 453 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 KATNBL1Q9H079 304 aa5.4□□□□□ -1.54
VPS13C-207ENST00000558919 GOLGA6L22H0YM25 854 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 B4GALT3O60512 393 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 CUTAO60888 179 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 KRT37O76014 449 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 SYN1P17600 705 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 ECE1P42892 770 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 KIF11P52732 1056 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 IL13RA1P78552 427 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 PLEKHG4Q58EX7 1191 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 DALRD3Q5D0E6 543 aaKnown RBP5.39□□□□□ -1.55
VPS13C-207ENST00000558919 CATSPEREQ5SY80 951 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 AHI1Q8N157 1196 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 HIPK4Q8NE63 616 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 ACSS2Q9NR19 701 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 UCKL1Q9NWZ5 548 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 FBXO10Q9UK96 956 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 CNOT11Q9UKZ1 510 aaKnown RBP5.39□□□□□ -1.55
VPS13C-207ENST00000558919 INVSQ9Y283 1065 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 ZDHHC9Q9Y397 364 aa5.39□□□□□ -1.55
VPS13C-207ENST00000558919 PRAMEF22A3QJZ6 481 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 FAM83GA6ND36 823 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 KRTAP9-7A8MTY7 169 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 H7C1D1 291 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 DVL2O14641 736 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 PLATP00750 562 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 CYP17A1P05093 508 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 POLD1P28340 1107 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 NEK4P51957 841 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 TOP3AQ13472 1001 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-207ENST00000558919 ZNF174Q15697 407 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 WDR72Q3MJ13 1102 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 DHX37Q8IY37 1157 aaKnown RBP5.38□□□□□ -1.55
VPS13C-207ENST00000558919 KBTBD2Q8IY47 623 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 WDR48Q8TAF3 677 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 CALML6Q8TD86 181 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 E2F7Q96AV8 911 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 FOXRED1Q96CU9 486 aaPredicted RBP5.38□□□□□ -1.55
VPS13C-207ENST00000558919 MFSD3Q96ES6 412 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 MTFR1LQ9H019 292 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 OR10A5Q9H207 317 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 ZKSCAN5Q9Y2L8 839 aa5.38□□□□□ -1.55
VPS13C-207ENST00000558919 TMA7Q9Y2S6 64 aaKnown RBP5.38□□□□□ -1.55
VPS13C-207ENST00000558919 MAFO75444 373 aaPredicted RBP5.37□□□□□ -1.55
VPS13C-207ENST00000558919 F2P00734 622 aa5.37□□□□□ -1.55
VPS13C-207ENST00000558919 CSF2RBP32927 897 aa5.37□□□□□ -1.55
VPS13C-207ENST00000558919 ALDH6A1Q02252 535 aaKnown RBP5.37□□□□□ -1.55
VPS13C-207ENST00000558919 TAF7LQ5H9L4 462 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms