RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 GABBR1Q9UBS5 961 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 GINS2Q9Y248 185 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 EYSQ5T1H1 3165 aa14.19□□□□□ -0.14
SMAD3-208ENST00000558827 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-208ENST00000558827 MBLAC1A4D2B0 266 aaPredicted RBP14.18□□□□□ -0.14
SMAD3-208ENST00000558827 RRN3P2A6NIE6 340 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 GJB5O95377 273 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 AMHP03971 560 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 CIITAP33076 1130 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 ANAPC15P60006 121 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 MRPS6P82932 125 aaKnown RBP14.18□□□□□ -0.14
SMAD3-208ENST00000558827 MGAT3Q09327 533 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 FAM26DQ5JW98 314 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 MCTP2Q6DN12 878 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 TAF2Q6P1X5 1199 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 MTHFD1LQ6UB35 978 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 RSPH3Q86UC2 560 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 TEX2Q8IWB9 1127 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 IFIH1Q9BYX4 1025 aaKnown RBP14.18□□□□□ -0.14
SMAD3-208ENST00000558827 AGO3Q9H9G7 860 aaKnown RBP14.18□□□□□ -0.14
SMAD3-208ENST00000558827 TBC1D22BQ9NU19 505 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 MICAL3Q7RTP6 2002 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 CUL9Q8IWT3 2517 aa14.18□□□□□ -0.14
SMAD3-208ENST00000558827 MYH9P35579 1960 aaKnown RBP14.18□□□□□ -0.14
SMAD3-208ENST00000558827 IGKV6D-21A0A0A0MT36 114 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 FAM205CA6NFA0 338 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 JAK2O60674 1132 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 GAS7O60861 476 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 CDKL5O76039 1030 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 CD52P31358 61 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 SETQ01105 290 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-208ENST00000558827 TMEM266Q2M3C6 531 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 ATP8B4Q8TF62 1192 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 GDPD5Q8WTR4 605 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 ZNF668Q96K58 619 aaPredicted RBP14.17□□□□□ -0.14
SMAD3-208ENST00000558827 RAD9AQ99638 391 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 UNC45AQ9H3U1 944 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 CDHR5Q9HBB8 845 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 PCDHA2Q9Y5H9 948 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 LOXHD1Q8IVV2 1947 aa14.17□□□□□ -0.14
SMAD3-208ENST00000558827 M0R2N6 131 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 HBP1O60381 514 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 CAND2O75155 1236 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 PSAPP07602 524 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 FDPSP14324 419 aaKnown RBP14.16□□□□□ -0.14
SMAD3-208ENST00000558827 USP11P51784 963 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 NONOQ15233 471 aaKnown RBP eCLIP14.16□□□□□ -0.14
SMAD3-208ENST00000558827 ANKRD1Q15327 319 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 SKIV2LQ15477 1246 aaKnown RBP14.16□□□□□ -0.14
SMAD3-208ENST00000558827 UGCGQ16739 394 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 LETM2Q2VYF4 491 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 EARS2Q5JPH6 523 aaKnown RBP14.16□□□□□ -0.14
SMAD3-208ENST00000558827 FBXO47Q5MNV8 452 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 LRCH2Q5VUJ6 765 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 ZNF746Q6NUN9 644 aaPredicted RBP14.16□□□□□ -0.14
SMAD3-208ENST00000558827 METTL13Q8N6R0 699 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 SH2D3AQ9BRG2 576 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 PHF20Q9BVI0 1012 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 DISC1Q9NRI5 854 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 PCDHA10Q9Y5I2 948 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 TRPV2Q9Y5S1 764 aa14.16□□□□□ -0.14
SMAD3-208ENST00000558827 SIP14410 1827 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 CCDC194A0A1B0GVG4 234 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 LINC01553A4QN01 128 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 TMEM150BA6NC51 233 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 ZBTB42B2RXF5 422 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 SLC37A4O43826 429 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 ZNF862O60290 1169 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 EFCAB14O75071 495 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 KRT76Q01546 638 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 GRB10Q13322 594 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 MKRN4PQ13434 485 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-208ENST00000558827 PIK3AP1Q6ZUJ8 805 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 SLC5A5Q92911 643 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 YME1L1Q96TA2 773 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 C17orf80Q9BSJ5 609 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 TEKT3Q9BXF9 490 aa14.15□□□□□ -0.14
SMAD3-208ENST00000558827 CELF4Q9BZC1 486 aaKnown RBP14.15□□□□□ -0.14
SMAD3-208ENST00000558827 UNC80Q8N2C7 3258 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 WDR64B1ANS9 1081 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 M0QZ92 97 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 ENPP3O14638 875 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 VTNP04004 478 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 CLCN3P51790 818 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 GUCY1B3Q02153 619 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 ST3GAL1Q11201 340 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 NFX1Q12986 1120 aaKnown RBP14.14□□□□□ -0.15
SMAD3-208ENST00000558827 NR5A1Q13285 461 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 ZNF484Q5JVG2 852 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 IER5Q5VY09 327 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 MIER3Q7Z3K6 550 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 KRT25Q7Z3Z0 450 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 RPAINQ86UA6 219 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 RTN4RL1Q86UN2 441 aaPredicted RBP14.14□□□□□ -0.15
SMAD3-208ENST00000558827 KIAA0319LQ8IZA0 1049 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 LRRC71Q8N4P6 559 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 DAGLBQ8NCG7 672 aa14.14□□□□□ -0.15
SMAD3-208ENST00000558827 NSUN7Q8NE18 718 aaKnown RBP14.14□□□□□ -0.15
SMAD3-208ENST00000558827 TNPO1Q92973 898 aaKnown RBP14.14□□□□□ -0.15
SMAD3-208ENST00000558827 GTF3C6Q969F1 213 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms