RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 ZNF577Q9BSK1 485 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 SLC26A6Q9BXS9 759 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 ZNF302Q9NR11 478 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 RAPGEFL1Q9UHV5 662 aa17.67■□□□□ 0.42
TPM1-211ENST00000558314 H3BNC9 293 aa17.66■□□□□ 0.42
TPM1-211ENST00000558314 RPS6KB1P23443 525 aa17.66■□□□□ 0.42
TPM1-211ENST00000558314 KLRC1P26715 233 aa17.66■□□□□ 0.42
TPM1-211ENST00000558314 HSPA4P34932 840 aa17.66■□□□□ 0.42
TPM1-211ENST00000558314 NFX1Q12986 1120 aaKnown RBP17.66■□□□□ 0.42
TPM1-211ENST00000558314 PAN2Q504Q3 1202 aaKnown RBP17.66■□□□□ 0.42
TPM1-211ENST00000558314 TIGD5Q53EQ6 642 aa17.66■□□□□ 0.42
TPM1-211ENST00000558314 TCEAL5Q5H9L2 206 aa17.66■□□□□ 0.42
TPM1-211ENST00000558314 MIS18BP1Q6P0N0 1132 aa17.66■□□□□ 0.42
TPM1-211ENST00000558314 MTHFD1LQ6UB35 978 aa17.66■□□□□ 0.42
TPM1-211ENST00000558314 BANK1Q8NDB2 785 aa17.66■□□□□ 0.42
TPM1-211ENST00000558314 PCDHA2Q9Y5H9 948 aa17.66■□□□□ 0.42
TPM1-211ENST00000558314 TRANK1O15050 2925 aa17.66■□□□□ 0.42
TPM1-211ENST00000558314 ADGRA3Q8IWK6 1321 aa17.66■□□□□ 0.42
TPM1-211ENST00000558314 H3BQ06 376 aaPredicted RBP17.65■□□□□ 0.42
TPM1-211ENST00000558314 IPO5O00410 1097 aaKnown RBP17.65■□□□□ 0.42
TPM1-211ENST00000558314 PSMA5P28066 241 aa17.65■□□□□ 0.42
TPM1-211ENST00000558314 RCAN1P53805 252 aa17.65■□□□□ 0.42
TPM1-211ENST00000558314 KRT76Q01546 638 aa17.65■□□□□ 0.42
TPM1-211ENST00000558314 PRR16Q569H4 304 aa17.65■□□□□ 0.42
TPM1-211ENST00000558314 ABHD15Q6UXT9 468 aa17.65■□□□□ 0.42
TPM1-211ENST00000558314 CCDC60Q8IWA6 550 aaPredicted RBP17.65■□□□□ 0.42
TPM1-211ENST00000558314 CELF4Q9BZC1 486 aaKnown RBP17.65■□□□□ 0.42
TPM1-211ENST00000558314 NCOA5Q9HCD5 579 aaKnown RBP17.65■□□□□ 0.42
TPM1-211ENST00000558314 VPS54Q9P1Q0 977 aa17.65■□□□□ 0.42
TPM1-211ENST00000558314 LRFN2Q9ULH4 789 aa17.65■□□□□ 0.42
TPM1-211ENST00000558314 PADI3Q9ULW8 664 aa17.65■□□□□ 0.42
TPM1-211ENST00000558314 SAMM50Q9Y512 469 aa17.65■□□□□ 0.42
TPM1-211ENST00000558314 REV3LO60673 3130 aa17.65■□□□□ 0.42
TPM1-211ENST00000558314 PRPF3O43395 683 aaKnown RBP17.64■□□□□ 0.41
TPM1-211ENST00000558314 HBP1O60381 514 aa17.64■□□□□ 0.41
TPM1-211ENST00000558314 REC8O95072 547 aa17.64■□□□□ 0.41
TPM1-211ENST00000558314 GNA11P29992 359 aa17.64■□□□□ 0.41
TPM1-211ENST00000558314 PKN1Q16512 942 aa17.64■□□□□ 0.41
TPM1-211ENST00000558314 NIPA1Q7RTP0 329 aa17.64■□□□□ 0.41
TPM1-211ENST00000558314 ATP8B4Q8TF62 1192 aa17.64■□□□□ 0.41
TPM1-211ENST00000558314 LINC01599Q8WXQ3 324 aa17.64■□□□□ 0.41
TPM1-211ENST00000558314 LARP6Q9BRS8 491 aaKnown RBP17.64■□□□□ 0.41
TPM1-211ENST00000558314 SMIM35A0A1B0GVV1 85 aa17.63■□□□□ 0.41
TPM1-211ENST00000558314 GRM6O15303 877 aa17.63■□□□□ 0.41
TPM1-211ENST00000558314 ATG7O95352 703 aa17.63■□□□□ 0.41
TPM1-211ENST00000558314 RPLP2P05387 115 aaKnown RBP17.63■□□□□ 0.41
TPM1-211ENST00000558314 SSTR3P32745 418 aaPredicted RBP17.63■□□□□ 0.41
TPM1-211ENST00000558314 BMPR1AP36894 532 aa17.63■□□□□ 0.41
TPM1-211ENST00000558314 SLC26A2P50443 739 aa17.63■□□□□ 0.41
TPM1-211ENST00000558314 PTCRAQ6ISU1 281 aaPredicted RBP17.63■□□□□ 0.41
TPM1-211ENST00000558314 RTN4RL1Q86UN2 441 aaPredicted RBP17.63■□□□□ 0.41
TPM1-211ENST00000558314 METTL13Q8N6R0 699 aa17.63■□□□□ 0.41
TPM1-211ENST00000558314 KCNB2Q92953 911 aa17.63■□□□□ 0.41
TPM1-211ENST00000558314 C11orf84Q9BUA3 381 aaPredicted RBP17.63■□□□□ 0.41
TPM1-211ENST00000558314 ZMYND12Q9H0C1 365 aa17.63■□□□□ 0.41
TPM1-211ENST00000558314 NSUN3Q9H649 340 aaKnown RBP17.63■□□□□ 0.41
TPM1-211ENST00000558314 IGFLR1Q9H665 355 aa17.63■□□□□ 0.41
TPM1-211ENST00000558314 EPHX3Q9H6B9 360 aa17.63■□□□□ 0.41
TPM1-211ENST00000558314 CLDND1Q9NY35 253 aa17.63■□□□□ 0.41
TPM1-211ENST00000558314 NCOR1O75376 2440 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 IGLV3-22A0A075B6J6 115 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 ESYT2A0FGR8 921 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 DHX15O43143 795 aaKnown RBP17.62■□□□□ 0.41
TPM1-211ENST00000558314 CHMP2AO43633 222 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 CYP3A4P08684 503 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 IL9P15248 144 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 GATMP50440 423 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 NLRP5P59047 1200 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 SETQ01105 290 aaPredicted RBP17.62■□□□□ 0.41
TPM1-211ENST00000558314 STK3Q13188 491 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 SPOUT1Q5T280 376 aaKnown RBP17.62■□□□□ 0.41
TPM1-211ENST00000558314 TEX2Q8IWB9 1127 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 CCDC148Q8NFR7 591 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 BICD2Q8TD16 824 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 FTHL17Q9BXU8 183 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 ALG13Q9NP73 1137 aaKnown RBP17.62■□□□□ 0.41
TPM1-211ENST00000558314 GABBR1Q9UBS5 961 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 RWDD3Q9Y3V2 267 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 MRPL42Q9Y6G3 142 aaKnown RBP17.62■□□□□ 0.41
TPM1-211ENST00000558314 XIRP2A4UGR9 3374 aa17.62■□□□□ 0.41
TPM1-211ENST00000558314 BRWD1Q9NSI6 2320 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 IGKV6D-21A0A0A0MT36 114 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.61■□□□□ 0.41
TPM1-211ENST00000558314 DENND3A2RUS2 1198 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 RPS6KA5O75582 802 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 DGKIO75912 1065 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 PSAPP07602 524 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 STAG3L1P0CL83 205 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 CLUL1Q15846 466 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 KIZQ2M2Z5 673 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 LEXMQ3ZCV2 418 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 ZNF484Q5JVG2 852 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 MCTP2Q6DN12 878 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 NPAS4Q8IUM7 802 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 NME8Q8N427 588 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.61■□□□□ 0.41
TPM1-211ENST00000558314 CDHR5Q9HBB8 845 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 TBC1D22BQ9NU19 505 aa17.61■□□□□ 0.41
TPM1-211ENST00000558314 NOC2LQ9Y3T9 749 aaKnown RBP17.61■□□□□ 0.41
TPM1-211ENST00000558314 IGSF9BQ9UPX0 1349 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms