RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 NME8Q8N427 588 aa18.21■□□□□ 0.51
SCFD1-224ENST00000557713 PLVAPQ9BX97 442 aa18.21■□□□□ 0.51
SCFD1-224ENST00000557713 FTHL17Q9BXU8 183 aa18.21■□□□□ 0.51
SCFD1-224ENST00000557713 ANO3Q9BYT9 981 aa18.21■□□□□ 0.51
SCFD1-224ENST00000557713 CELF4Q9BZC1 486 aaKnown RBP18.21■□□□□ 0.51
SCFD1-224ENST00000557713 PADI3Q9ULW8 664 aa18.21■□□□□ 0.51
SCFD1-224ENST00000557713 TTC3P53804 2025 aa18.21■□□□□ 0.51
SCFD1-224ENST00000557713 IGSF9BQ9UPX0 1349 aa18.21■□□□□ 0.51
SCFD1-224ENST00000557713 SMIM35A0A1B0GVV1 85 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 SMCO2A6NFE2 343 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 C19orf67A6NJJ6 358 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 hCG_1984214I3L0E3 225 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 ZBTB43O43298 467 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 SREBF1P36956 1147 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 ADCY7P51828 1080 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 RTN1Q16799 776 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 DHX32Q7L7V1 743 aaKnown RBP18.2■□□□□ 0.5
SCFD1-224ENST00000557713 CMTR2Q8IYT2 770 aaKnown RBP18.2■□□□□ 0.5
SCFD1-224ENST00000557713 ZNF713Q8N859 430 aaPredicted RBP18.2■□□□□ 0.5
SCFD1-224ENST00000557713 P2RX5Q93086 422 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 FAM217BQ9NTX9 383 aaPredicted RBP18.2■□□□□ 0.5
SCFD1-224ENST00000557713 TMEM260Q9NX78 707 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 BARHL2Q9NY43 387 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 PRKAG3Q9UGI9 489 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 PLAGL2Q9UPG8 496 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 FAM50BQ9Y247 325 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 MRPL42Q9Y6G3 142 aaKnown RBP18.2■□□□□ 0.5
SCFD1-224ENST00000557713 KDM3AQ9Y4C1 1321 aa18.2■□□□□ 0.5
SCFD1-224ENST00000557713 ATG2AQ2TAZ0 1938 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 PRR33A8MZF0 331 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 MMP1P03956 469 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 ALADP13716 330 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 SLC26A2P50443 739 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 ZP2Q05996 745 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 DLX2Q07687 328 aaPredicted RBP18.19■□□□□ 0.5
SCFD1-224ENST00000557713 AP3B2Q13367 1082 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 NAALADL2Q58DX5 795 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 BMP2KLQ5H9B9 411 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 MTHFD1LQ6UB35 978 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 ABHD15Q6UXT9 468 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 NPAS4Q8IUM7 802 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 RASEFQ8IZ41 740 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 TCEANC2Q96MN5 208 aa18.19■□□□□ 0.5
SCFD1-224ENST00000557713 ALG13Q9NP73 1137 aaKnown RBP18.19■□□□□ 0.5
SCFD1-224ENST00000557713 M0QZ92 97 aa18.18■□□□□ 0.5
SCFD1-224ENST00000557713 CCNE2O96020 404 aa18.18■□□□□ 0.5
SCFD1-224ENST00000557713 CDC27P30260 824 aa18.18■□□□□ 0.5
SCFD1-224ENST00000557713 PAK2Q13177 524 aa18.18■□□□□ 0.5
SCFD1-224ENST00000557713 ADCK5Q3MIX3 580 aa18.18■□□□□ 0.5
SCFD1-224ENST00000557713 NIPA1Q7RTP0 329 aa18.18■□□□□ 0.5
SCFD1-224ENST00000557713 SPPL3Q8TCT6 385 aa18.18■□□□□ 0.5
SCFD1-224ENST00000557713 GLT8D2Q9H1C3 349 aa18.18■□□□□ 0.5
SCFD1-224ENST00000557713 TMX1Q9H3N1 280 aa18.18■□□□□ 0.5
SCFD1-224ENST00000557713 DHX15O43143 795 aaKnown RBP18.17■□□□□ 0.5
SCFD1-224ENST00000557713 STAG3L1P0CL83 205 aa18.17■□□□□ 0.5
SCFD1-224ENST00000557713 SCG2P13521 617 aa18.17■□□□□ 0.5
SCFD1-224ENST00000557713 DNAJB1P25685 340 aa18.17■□□□□ 0.5
SCFD1-224ENST00000557713 KLRC1P26715 233 aa18.17■□□□□ 0.5
SCFD1-224ENST00000557713 HOXD11P31277 338 aaPredicted RBP18.17■□□□□ 0.5
SCFD1-224ENST00000557713 GTF2F1P35269 517 aaKnown RBP eCLIP18.17■□□□□ 0.5
SCFD1-224ENST00000557713 KRT76Q01546 638 aa18.17■□□□□ 0.5
SCFD1-224ENST00000557713 ADAM15Q13444 863 aa18.17■□□□□ 0.5
SCFD1-224ENST00000557713 SMAD2Q15796 467 aaKnown RBP18.17■□□□□ 0.5
SCFD1-224ENST00000557713 FAM43BQ6ZT52 329 aaPredicted RBP18.17■□□□□ 0.5
SCFD1-224ENST00000557713 ADHFE1Q8IWW8 467 aa18.17■□□□□ 0.5
SCFD1-224ENST00000557713 CRYGNQ8WXF5 182 aa18.17■□□□□ 0.5
SCFD1-224ENST00000557713 IGLV3-22A0A075B6J6 115 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 KLF18A0A0U1RQI7 1052 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 GOLGA8AA7E2F4 631 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 GOLGA8BA8MQT2 603 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 FAM86B1E9PN63 330 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 LINC01565O15544 149 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 MBTPS2O43462 519 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 HBP1O60381 514 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 ITGB1P05556 798 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 CYP3A4P08684 503 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 FAM86B2P0C5J1 330 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 ZNF76P36508 570 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 RCAN1P53805 252 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 SKAP1Q86WV1 359 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 KIAA0319LQ8IZA0 1049 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 ATP8B4Q8TF62 1192 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 IGFLR1Q9H665 355 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 CDHR5Q9HBB8 845 aa18.16■□□□□ 0.5
SCFD1-224ENST00000557713 ZBTB42B2RXF5 422 aa18.15■□□□□ 0.5
SCFD1-224ENST00000557713 DDX39AO00148 427 aaKnown RBP18.15■□□□□ 0.5
SCFD1-224ENST00000557713 DCXO43602 365 aa18.15■□□□□ 0.5
SCFD1-224ENST00000557713 TBX10O75333 385 aa18.15■□□□□ 0.5
SCFD1-224ENST00000557713 ATP4AP20648 1035 aa18.15■□□□□ 0.5
SCFD1-224ENST00000557713 ADD1P35611 737 aaKnown RBP18.15■□□□□ 0.5
SCFD1-224ENST00000557713 GATMP50440 423 aa18.15■□□□□ 0.5
SCFD1-224ENST00000557713 CLUL1Q15846 466 aa18.15■□□□□ 0.5
SCFD1-224ENST00000557713 PFKFB3Q16875 520 aaPredicted RBP18.15■□□□□ 0.5
SCFD1-224ENST00000557713 TMEM266Q2M3C6 531 aa18.15■□□□□ 0.5
SCFD1-224ENST00000557713 PAN2Q504Q3 1202 aaKnown RBP18.15■□□□□ 0.5
SCFD1-224ENST00000557713 ZNF484Q5JVG2 852 aa18.15■□□□□ 0.5
SCFD1-224ENST00000557713 JAKMIP3Q5VZ66 844 aa18.15■□□□□ 0.5
SCFD1-224ENST00000557713 FAM160B1Q5W0V3 765 aa18.15■□□□□ 0.5
SCFD1-224ENST00000557713 PLA2G4DQ86XP0 818 aa18.15■□□□□ 0.5
SCFD1-224ENST00000557713 CCDC60Q8IWA6 550 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms