RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 TNPO1Q92973 898 aaKnown RBP18.74■□□□□ 0.59
VSX1-207ENST00000557285 IFIH1Q9BYX4 1025 aaKnown RBP18.74■□□□□ 0.59
VSX1-207ENST00000557285 CDY2AQ9Y6F7 541 aa18.74■□□□□ 0.59
VSX1-207ENST00000557285 STK36Q9NRP7 1315 aa18.74■□□□□ 0.59
VSX1-207ENST00000557285 LOXHD1Q8IVV2 1947 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 IGKV6D-21A0A0A0MT36 114 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 GAS7O60861 476 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 UPP2O95045 317 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 AMHP03971 560 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 PSAPP07602 524 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 XBP1P17861 261 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 USP11P51784 963 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 KRT76Q01546 638 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 NONOQ15233 471 aaKnown RBP eCLIP18.73■□□□□ 0.59
VSX1-207ENST00000557285 CCDC85BQ15834 202 aaPredicted RBP18.73■□□□□ 0.59
VSX1-207ENST00000557285 INF2Q27J81 1249 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 FAM26DQ5JW98 314 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 LRCH2Q5VUJ6 765 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 USP38Q8NB14 1042 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 DAGLBQ8NCG7 672 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 PHF20Q9BVI0 1012 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 C22orf23Q9BZE7 217 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 GABBR1Q9UBS5 961 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 A0A0C4DFX4 3053 aa18.73■□□□□ 0.59
VSX1-207ENST00000557285 WDR81Q562E7 1941 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 CCDC194A0A1B0GVG4 234 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 M0R2N6 131 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 KLRC1P26715 233 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 SLC26A2P50443 739 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 MRPS6P82932 125 aaKnown RBP18.72■□□□□ 0.59
VSX1-207ENST00000557285 TAP1Q03518 808 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 MGAT3Q09327 533 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 LETM2Q2VYF4 491 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 GALNT17Q6IS24 598 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.72■□□□□ 0.59
VSX1-207ENST00000557285 OXER1Q8TDS5 423 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 ATP8B4Q8TF62 1192 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 GTF3C6Q969F1 213 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 MTUS1Q9ULD2 1270 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 PCDHA10Q9Y5I2 948 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 EVPLQ92817 2033 aa18.72■□□□□ 0.59
VSX1-207ENST00000557285 EPOPA6NHQ4 379 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 WDR64B1ANS9 1081 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 M0QZ92 97 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 HBP1O60381 514 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 JAK2O60674 1132 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 GJB5O95377 273 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 ATP4AP20648 1035 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 LPIN1Q14693 890 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 C8orf34Q49A92 452 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 MTHFD1LQ6UB35 978 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 KRT25Q7Z3Z0 450 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 SMAP1Q8IYB5 467 aaPredicted RBP18.71■□□□□ 0.59
VSX1-207ENST00000557285 PPP1R16BQ96T49 567 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 TEKT3Q9BXF9 490 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 UNC45AQ9H3U1 944 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 DDX25Q9UHL0 483 aaKnown RBP18.71■□□□□ 0.59
VSX1-207ENST00000557285 GINS2Q9Y248 185 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 PCDHA2Q9Y5H9 948 aa18.71■□□□□ 0.59
VSX1-207ENST00000557285 IER5Q5VY09 327 aa18.7■□□□□ 0.58
VSX1-207ENST00000557285 PIK3AP1Q6ZUJ8 805 aa18.7■□□□□ 0.58
VSX1-207ENST00000557285 RPAINQ86UA6 219 aa18.7■□□□□ 0.58
VSX1-207ENST00000557285 WASF1Q92558 559 aa18.7■□□□□ 0.58
VSX1-207ENST00000557285 SLC5A5Q92911 643 aa18.7■□□□□ 0.58
VSX1-207ENST00000557285 IL17RAQ96F46 866 aa18.7■□□□□ 0.58
VSX1-207ENST00000557285 RAD9AQ99638 391 aa18.7■□□□□ 0.58
VSX1-207ENST00000557285 DISC1Q9NRI5 854 aa18.7■□□□□ 0.58
VSX1-207ENST00000557285 TRPV2Q9Y5S1 764 aa18.7■□□□□ 0.58
VSX1-207ENST00000557285 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.69■□□□□ 0.58
VSX1-207ENST00000557285 SLC37A4O43826 429 aa18.69■□□□□ 0.58
VSX1-207ENST00000557285 FDPSP14324 419 aaKnown RBP18.69■□□□□ 0.58
VSX1-207ENST00000557285 IBSPP21815 317 aaPredicted RBP18.69■□□□□ 0.58
VSX1-207ENST00000557285 CD52P31358 61 aa18.69■□□□□ 0.58
VSX1-207ENST00000557285 UGCGQ16739 394 aa18.69■□□□□ 0.58
VSX1-207ENST00000557285 Q4G0T1 1027 aa18.69■□□□□ 0.58
VSX1-207ENST00000557285 FBXO47Q5MNV8 452 aa18.69■□□□□ 0.58
VSX1-207ENST00000557285 METTL13Q8N6R0 699 aa18.69■□□□□ 0.58
VSX1-207ENST00000557285 NSUN7Q8NE18 718 aaKnown RBP18.69■□□□□ 0.58
VSX1-207ENST00000557285 APBB2Q92870 758 aa18.69■□□□□ 0.58
VSX1-207ENST00000557285 RIT2Q99578 217 aa18.69■□□□□ 0.58
VSX1-207ENST00000557285 PRDM6Q9NQX0 595 aa18.69■□□□□ 0.58
VSX1-207ENST00000557285 MAFBQ9Y5Q3 323 aaPredicted RBP18.69■□□□□ 0.58
VSX1-207ENST00000557285 COL4A4P53420 1690 aaPredicted RBP18.69■□□□□ 0.58
VSX1-207ENST00000557285 FAM205CA6NFA0 338 aa18.68■□□□□ 0.58
VSX1-207ENST00000557285 ZBTB42B2RXF5 422 aa18.68■□□□□ 0.58
VSX1-207ENST00000557285 MKRN4PQ13434 485 aaPredicted RBP18.68■□□□□ 0.58
VSX1-207ENST00000557285 ZNF484Q5JVG2 852 aa18.68■□□□□ 0.58
VSX1-207ENST00000557285 KRT40Q6A162 431 aa18.68■□□□□ 0.58
VSX1-207ENST00000557285 TSHZ1Q6ZSZ6 1077 aa18.68■□□□□ 0.58
VSX1-207ENST00000557285 MIER3Q7Z3K6 550 aa18.68■□□□□ 0.58
VSX1-207ENST00000557285 FAM177A1Q8N128 213 aaPredicted RBP18.68■□□□□ 0.58
VSX1-207ENST00000557285 BBXQ8WY36 941 aaPredicted RBP18.68■□□□□ 0.58
VSX1-207ENST00000557285 YME1L1Q96TA2 773 aa18.68■□□□□ 0.58
VSX1-207ENST00000557285 AGO3Q9H9G7 860 aaKnown RBP18.68■□□□□ 0.58
VSX1-207ENST00000557285 COL1A2P08123 1366 aa18.68■□□□□ 0.58
VSX1-207ENST00000557285 CYP3A7-CYP3A51PA0A087WV96 503 aa18.67■□□□□ 0.58
VSX1-207ENST00000557285 SMIM35A0A1B0GVV1 85 aa18.67■□□□□ 0.58
VSX1-207ENST00000557285 CCNT1O60563 726 aaKnown RBP18.67■□□□□ 0.58
VSX1-207ENST00000557285 CYP3A7P24462 503 aa18.67■□□□□ 0.58
VSX1-207ENST00000557285 KRT2P35908 639 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms