RNA–Protein interactions for RNA: ENST00000557143.1

KLC1-222, Transcript of kinesin light chain 1, human

TSL 2

Gene KLC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLC1-222	ENST00000557143	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	ZBBX	A8MT70	800 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	IPO5	O00410	1097 aa	Known RBP	13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	LGR5	O75473	907 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	ATG7	O95352	703 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	TDP2	O95551	362 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	CTSH	P09668	335 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	ATP4A	P20648	1035 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	CIITA	P33076	1130 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	IGBP1	P78318	339 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	ABHD15	Q6UXT9	468 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	NIPA1	Q7RTP0	329 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	RPUSD2	Q8IZ73	545 aa	Known RBP	13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	NSUN7	Q8NE18	718 aa	Known RBP	13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	CCDC148	Q8NFR7	591 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	GTF3C6	Q969F1	213 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	KCNK17	Q96T54	332 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	SDF4	Q9BRK5	362 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	ZNF577	Q9BSK1	485 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	PHF20	Q9BVI0	1012 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	PBX4	Q9BYU1	374 aa		13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	ORC3	Q9UBD5	711 aa	Predicted RBP	13.7	□□□□□ -0.22
KLC1-222	ENST00000557143	NFASC	O94856	1347 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	MSH4	O15457	936 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	ARHGEF15	O94989	841 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	INSRR	P14616	1297 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	DNAJB2	P25686	324 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	RBL2	Q08999	1139 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	PLCB4	Q15147	1175 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	ANKRD1	Q15327	319 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	GRIK4	Q16099	956 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	INF2	Q27J81	1249 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	SWSAP1	Q6NVH7	229 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	CPLX2	Q6PUV4	134 aa	Known RBP	13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	PADI6	Q6TGC4	694 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	TEX2	Q8IWB9	1127 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	ZNF687	Q8N1G0	1237 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	CAGE1	Q8TC20	777 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	BICD2	Q8TD16	824 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	AFAP1L1	Q8TED9	768 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	C22orf23	Q9BZE7	217 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	SMARCAD1	Q9H4L7	1026 aa		13.69	□□□□□ -0.22
KLC1-222	ENST00000557143	IGKV6D-21	A0A0A0MT36	114 aa		13.68	□□□□□ -0.22
KLC1-222	ENST00000557143	ARHGAP33	O14559	1287 aa		13.68	□□□□□ -0.22
KLC1-222	ENST00000557143	PPFIA1	Q13136	1202 aa		13.68	□□□□□ -0.22
KLC1-222	ENST00000557143	NR5A1	Q13285	461 aa		13.68	□□□□□ -0.22
KLC1-222	ENST00000557143	GRIN2C	Q14957	1233 aa		13.68	□□□□□ -0.22
KLC1-222	ENST00000557143	DAGLB	Q8NCG7	672 aa		13.68	□□□□□ -0.22
KLC1-222	ENST00000557143	CDX2	Q99626	313 aa	Predicted RBP	13.68	□□□□□ -0.22
KLC1-222	ENST00000557143	NKX2-4	Q9H2Z4	354 aa		13.68	□□□□□ -0.22
KLC1-222	ENST00000557143	ERAP1	Q9NZ08	941 aa		13.68	□□□□□ -0.22
KLC1-222	ENST00000557143	ZNF215	Q9UL58	517 aa	Predicted RBP	13.68	□□□□□ -0.22
KLC1-222	ENST00000557143	SLC4A7	Q9Y6M7	1214 aa		13.68	□□□□□ -0.22
KLC1-222	ENST00000557143	DOCK5	Q9H7D0	1870 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	RSPH10B2	B2RC85	870 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	WNT7A	O00755	349 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	SLC37A4	O43826	429 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	CDKL5	O76039	1030 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	CHRNA1	P02708	482 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	CXCL10	P02778	98 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	RSPH10B	P0C881	870 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	STAT5B	P51692	787 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	DEFB103A	P81534	67 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	GUCY1B3	Q02153	619 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	MCTP2	Q6DN12	878 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	SPRED2	Q7Z698	418 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	CCDC83	Q8IWF9	413 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	CCDC155	Q8N6L0	562 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	DBF4B	Q8NFT6	615 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	DNAJB3	Q8WWF6	145 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	MYLIP	Q8WY64	445 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	HS3ST6	Q96QI5	342 aa		13.67	□□□□□ -0.22
KLC1-222	ENST00000557143	EMSY	Q7Z589	1322 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	NRCAM	Q92823	1304 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	STK36	Q9NRP7	1315 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	MYH7B	A7E2Y1	1941 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	BACH1	O14867	736 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	TRIM66	O15016	1216 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	CD2BP2	O95400	341 aa	Known RBP	13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	ATP2A2	P16615	1042 aa	Known RBP	13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	RFC2	P35250	354 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	USP11	P51784	963 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	TMEM62	Q0P6H9	643 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	UGCG	Q16739	394 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	ZNF697	Q5TEC3	545 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	SLC5A5	Q92911	643 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	TIFA	Q96CG3	184 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	UNC45A	Q9H3U1	944 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	AZI2	Q9H6S1	392 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	LIMCH1	Q9UPQ0	1083 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	CHD7	Q9P2D1	2997 aa		13.66	□□□□□ -0.22
KLC1-222	ENST00000557143	CDH23	Q9H251	3354 aa		13.65	□□□□□ -0.22
KLC1-222	ENST00000557143	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.65	□□□□□ -0.22
KLC1-222	ENST00000557143	POTEB3	A0JP26	581 aa		13.65	□□□□□ -0.22
KLC1-222	ENST00000557143	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms