RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 POTEB3A0JP26 581 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 RRN3P2A6NIE6 340 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 BACH1O14867 736 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 EFCAB14O75071 495 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 GHRP10912 638 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 CYP3A7P24462 503 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 MRPS6P82932 125 aaKnown RBP11.7□□□□□ -0.54
SHMT2-224ENST00000556737 KRT76Q01546 638 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 TAP1Q03518 808 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 LPIN1Q14693 890 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 Q4G0T1 1027 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 MIS18BP1Q6P0N0 1132 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 POTEBQ6S5H4 581 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 MOXD1Q6UVY6 613 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 B3GNT9Q6UX72 402 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 SMAP1Q8IYB5 467 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-224ENST00000556737 NSUN7Q8NE18 718 aaKnown RBP11.7□□□□□ -0.54
SHMT2-224ENST00000556737 ETNPPLQ8TBG4 499 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 OXER1Q8TDS5 423 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 ATP8B4Q8TF62 1192 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 DNAJB3Q8WWF6 145 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 SEPT8Q92599 483 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 GJA10Q969M2 543 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 KIF2CQ99661 725 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 C22orf23Q9BZE7 217 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 ZNF302Q9NR11 478 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 PCDHA2Q9Y5H9 948 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 MAFBQ9Y5Q3 323 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-224ENST00000556737 CDY2AQ9Y6F7 541 aa11.7□□□□□ -0.54
SHMT2-224ENST00000556737 VCANP13611 3396 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-224ENST00000556737 SLC37A4O43826 429 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 TLL1O43897 1013 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 ZNF862O60290 1169 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 HBP1O60381 514 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 JAK2O60674 1132 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 PSMD10O75832 226 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 NEK4P51957 841 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 NONOQ15233 471 aaKnown RBP eCLIP11.69□□□□□ -0.54
SHMT2-224ENST00000556737 UGCGQ16739 394 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 EARS2Q5JPH6 523 aaKnown RBP11.69□□□□□ -0.54
SHMT2-224ENST00000556737 FBXO47Q5MNV8 452 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 FAM160B1Q5W0V3 765 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 SWSAP1Q6NVH7 229 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 PDXDC2PQ6P474 469 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 MTHFD1LQ6UB35 978 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 KRT25Q7Z3Z0 450 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 SLC17A8Q8NDX2 589 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 TNFRSF25Q93038 417 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 RIT2Q99578 217 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 IFIH1Q9BYX4 1025 aaKnown RBP11.69□□□□□ -0.54
SHMT2-224ENST00000556737 FAM49AQ9H0Q0 323 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-224ENST00000556737 UNC45AQ9H3U1 944 aa11.69□□□□□ -0.54
SHMT2-224ENST00000556737 ORC3Q9UBD5 711 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-224ENST00000556737 RALGAPA2Q2PPJ7 1873 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 NLRC5Q86WI3 1866 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 SMIM35A0A1B0GVV1 85 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 FAM205CA6NFA0 338 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 WDR64B1ANS9 1081 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 C22orf31O95567 290 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 AMHP03971 560 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 RPLP2P05387 115 aaKnown RBP11.68□□□□□ -0.54
SHMT2-224ENST00000556737 PSAPP07602 524 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 HTRA4P83105 476 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-224ENST00000556737 INF2Q27J81 1249 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 LRCH2Q5VUJ6 765 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 TSHZ1Q6ZSZ6 1077 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 RSPH3Q86UC2 560 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 SP7Q8TDD2 431 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-224ENST00000556737 LINC01599Q8WXQ3 324 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 APBB2Q92870 758 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 GAS2L1Q99501 681 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-224ENST00000556737 TEKT3Q9BXF9 490 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 AGO3Q9H9G7 860 aaKnown RBP11.68□□□□□ -0.54
SHMT2-224ENST00000556737 GABBR1Q9UBS5 961 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 PCDHA10Q9Y5I2 948 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 TRPV2Q9Y5S1 764 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 ATG2AQ2TAZ0 1938 aa11.68□□□□□ -0.54
SHMT2-224ENST00000556737 ARID2Q68CP9 1835 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 KIAA1671Q9BY89 1806 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 KDM3AQ9Y4C1 1321 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 LINC01553A4QN01 128 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 KIF28PB7ZC32 967 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 RFXAPO00287 272 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 CHMP2AO43633 222 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 GAS7O60861 476 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 KLRC1P26715 233 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 PRKCEQ02156 737 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 TMEM62Q0P6H9 643 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 NR5A1Q13285 461 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 ZNF484Q5JVG2 852 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 FAM117BQ6P1L5 589 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 NEK8Q86SG6 692 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.67□□□□□ -0.54
SHMT2-224ENST00000556737 MYOCDQ8IZQ8 938 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 LINC01465Q8N7H1 131 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 BBXQ8WY36 941 aaPredicted RBP11.67□□□□□ -0.54
SHMT2-224ENST00000556737 WASF1Q92558 559 aa11.67□□□□□ -0.54
SHMT2-224ENST00000556737 TNPO1Q92973 898 aaKnown RBP11.67□□□□□ -0.54
SHMT2-224ENST00000556737 RAD9AQ99638 391 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms