RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 CHTF18Q8WVB6 975 aa6.58□□□□□ -1.36
SCFD1-221ENST00000556534 KCNC2Q96PR1 638 aa6.58□□□□□ -1.36
SCFD1-221ENST00000556534 AMNQ9BXJ7 453 aa6.58□□□□□ -1.36
SCFD1-221ENST00000556534 PCIF1Q9H4Z3 704 aa6.58□□□□□ -1.36
SCFD1-221ENST00000556534 LUC7LQ9NQ29 371 aaKnown RBP6.58□□□□□ -1.36
SCFD1-221ENST00000556534 INCENPQ9NQS7 918 aa6.58□□□□□ -1.36
SCFD1-221ENST00000556534 ZKSCAN5Q9Y2L8 839 aa6.58□□□□□ -1.36
SCFD1-221ENST00000556534 ASB1Q9Y576 335 aa6.58□□□□□ -1.36
SCFD1-221ENST00000556534 GAS7O60861 476 aa6.57□□□□□ -1.36
SCFD1-221ENST00000556534 KNG1P01042 644 aa6.57□□□□□ -1.36
SCFD1-221ENST00000556534 SMAD2Q15796 467 aaKnown RBP6.57□□□□□ -1.36
SCFD1-221ENST00000556534 PRAMEF18Q5VWM3 479 aa6.57□□□□□ -1.36
SCFD1-221ENST00000556534 ESRP1Q6NXG1 681 aaKnown RBP6.57□□□□□ -1.36
SCFD1-221ENST00000556534 ZNF761Q86XN6 746 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-221ENST00000556534 STPG3Q8N7X2 389 aa6.57□□□□□ -1.36
SCFD1-221ENST00000556534 MARCH10Q8NA82 808 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-221ENST00000556534 ADAMTS17Q8TE56 1095 aa6.57□□□□□ -1.36
SCFD1-221ENST00000556534 LEO1Q8WVC0 666 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-221ENST00000556534 FOXRED1Q96CU9 486 aaPredicted RBP6.57□□□□□ -1.36
SCFD1-221ENST00000556534 YTHDC1Q96MU7 727 aaKnown RBP6.57□□□□□ -1.36
SCFD1-221ENST00000556534 TACO1Q9BSH4 297 aaKnown RBP6.57□□□□□ -1.36
SCFD1-221ENST00000556534 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.57□□□□□ -1.36
SCFD1-221ENST00000556534 ACSS2Q9NR19 701 aa6.57□□□□□ -1.36
SCFD1-221ENST00000556534 THG1LQ9NWX6 298 aaKnown RBP6.57□□□□□ -1.36
SCFD1-221ENST00000556534 PRKAB1Q9Y478 270 aa6.57□□□□□ -1.36
SCFD1-221ENST00000556534 SPO11Q9Y5K1 396 aa6.57□□□□□ -1.36
SCFD1-221ENST00000556534 DDX3XO00571 662 aaKnown RBP eCLIP6.56□□□□□ -1.36
SCFD1-221ENST00000556534 CYP7B1O75881 506 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 CHGBP05060 677 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 SLC9A1P19634 815 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 PTX3P26022 381 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-221ENST00000556534 ADCYAP1R1P41586 468 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 IL13RA1P78552 427 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 FAM26FQ5R3K3 315 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 TRMT10BQ6PF06 316 aaKnown RBP6.56□□□□□ -1.36
SCFD1-221ENST00000556534 LRSAM1Q6UWE0 723 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 EFHBQ8N7U6 833 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 SYT8Q8NBV8 401 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 HIPK4Q8NE63 616 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 OR2W6PQ8NHA6 318 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 C16orf92Q96LL3 132 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 ELF4Q99607 663 aaPredicted RBP6.56□□□□□ -1.36
SCFD1-221ENST00000556534 CAAP1Q9H8G2 361 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 UCKL1Q9NWZ5 548 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 GALNT8Q9NY28 637 aa6.56□□□□□ -1.36
SCFD1-221ENST00000556534 PRAMEF22A3QJZ6 481 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 GOLGA6L22H0YM25 854 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 TGM5O43548 720 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 KLHL18O94889 574 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 FBXO21O94952 628 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 BPIP17213 487 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 IL13P35225 146 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 SOX5P35711 763 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 DHCR24Q15392 516 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 STILQ15468 1287 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 ZNF174Q15697 407 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 KRT26Q7Z3Y9 468 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 UBR7Q8N806 425 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 CHAC2Q8WUX2 184 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 ZMAT4Q9H898 229 aa6.55□□□□□ -1.36
SCFD1-221ENST00000556534 PRLP01236 227 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 CYP17A1P05093 508 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 BMP7P18075 431 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 LSSP48449 732 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 KCNC1P48547 511 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 SCNN1BP51168 640 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 ALDH6A1Q02252 535 aaKnown RBP6.54□□□□□ -1.36
SCFD1-221ENST00000556534 FZD5Q13467 585 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 EPHA7Q15375 998 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 KANK2Q63ZY3 851 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 STRA8Q7Z7C7 330 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 AFAP1L2Q8N4X5 818 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 TXNDC5Q8NBS9 432 aaKnown RBP6.54□□□□□ -1.36
SCFD1-221ENST00000556534 NUDT10Q8NFP7 164 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 ERCC4Q92889 916 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-221ENST00000556534 NUDT11Q96G61 164 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 GPR101Q96P66 508 aaPredicted RBP6.54□□□□□ -1.36
SCFD1-221ENST00000556534 FOXB1Q99853 325 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 BTBD2Q9BX70 525 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 L2HGDHQ9H9P8 463 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 SPTLC3Q9NUV7 552 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 IFT57Q9NWB7 429 aa6.54□□□□□ -1.36
SCFD1-221ENST00000556534 NOBOXO60393 691 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 ECE1P42892 770 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 KPNA1P52294 538 aaPredicted RBP6.53□□□□□ -1.36
SCFD1-221ENST00000556534 IL2P60568 153 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 RGL3Q3MIN7 710 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 MCTP2Q6DN12 878 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 ZNF662Q6ZS27 426 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 FEZF2Q8TBJ5 459 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 MBD6Q96DN6 1003 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 OR10A5Q9H207 317 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 TMX1Q9H3N1 280 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 TOMM22Q9NS69 142 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 FTSJ1Q9UET6 329 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.53□□□□□ -1.36
SCFD1-221ENST00000556534 SBNO2Q9Y2G9 1366 aa6.53□□□□□ -1.36
SCFD1-221ENST00000556534 C9orf118A6NHY6 69 aa6.52□□□□□ -1.37
SCFD1-221ENST00000556534 H0Y858 1186 aa6.52□□□□□ -1.37
SCFD1-221ENST00000556534 FKBP9O95302 570 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms