RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 CA3P07451 260 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 GHRP10912 638 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 RBM25P49756 843 aaKnown RBP9.18□□□□□ -0.94
VTI1B-206ENST00000556461 TMEM62Q0P6H9 643 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 MYO9BQ13459 2157 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 NONOQ15233 471 aaKnown RBP eCLIP9.18□□□□□ -0.94
VTI1B-206ENST00000556461 RAB30Q15771 203 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 LETM2Q2VYF4 491 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 LRCH2Q5VUJ6 765 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 FAM160B1Q5W0V3 765 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 MTHFD1LQ6UB35 978 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 B3GNT9Q6UX72 402 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 PIK3AP1Q6ZUJ8 805 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 TRMT1LQ7Z2T5 733 aaKnown RBP9.18□□□□□ -0.94
VTI1B-206ENST00000556461 KRT25Q7Z3Z0 450 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 RPAINQ86UA6 219 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 FAM177A1Q8N128 213 aaPredicted RBP9.18□□□□□ -0.94
VTI1B-206ENST00000556461 PHOSPHO2Q8TCD6 241 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 ATP8B4Q8TF62 1192 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 SLC9A7Q96T83 725 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 PRDM12Q9H4Q4 367 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 GABBR1Q9UBS5 961 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 LIMCH1Q9UPQ0 1083 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 PCDHA2Q9Y5H9 948 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 PCDHA11Q9Y5I1 949 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 PCDHA10Q9Y5I2 948 aa9.18□□□□□ -0.94
VTI1B-206ENST00000556461 MAFBQ9Y5Q3 323 aaPredicted RBP9.18□□□□□ -0.94
VTI1B-206ENST00000556461 PTPRSQ13332 1948 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 GBF1Q92538 1859 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 IGSF9BQ9UPX0 1349 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 CCDC194A0A1B0GVG4 234 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.17□□□□□ -0.94
VTI1B-206ENST00000556461 EPOPA6NHQ4 379 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 RRN3P2A6NIE6 340 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 WDR64B1ANS9 1081 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 BTBD18B2RXH4 712 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 RFXAPO00287 272 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 EML1O00423 815 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 HBP1O60381 514 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 CAND2O75155 1236 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 KLRC1P26715 233 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 KRT76Q01546 638 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 GUCY1B3Q02153 619 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 ADGRE1Q14246 886 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 LPIN1Q14693 890 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 KRT40Q6A162 431 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 FAM117BQ6P1L5 589 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 TAF2Q6P1X5 1199 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 SMAP1Q8IYB5 467 aaPredicted RBP9.17□□□□□ -0.94
VTI1B-206ENST00000556461 RIT2Q99578 217 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 AGO3Q9H9G7 860 aaKnown RBP9.17□□□□□ -0.94
VTI1B-206ENST00000556461 CERS4Q9HA82 394 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 DISC1Q9NRI5 854 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 DDX25Q9UHL0 483 aaKnown RBP9.17□□□□□ -0.94
VTI1B-206ENST00000556461 CDY2AQ9Y6F7 541 aa9.17□□□□□ -0.94
VTI1B-206ENST00000556461 ABHD14A-ACY1A0A1B0GW23 586 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 TMEM150BA6NC51 233 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 STBD1O95210 358 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 CD2BP2O95400 341 aaKnown RBP9.16□□□□□ -0.94
VTI1B-206ENST00000556461 C22orf31O95567 290 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 MMP1P03956 469 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 PSAPP07602 524 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 FOSL2P15408 326 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 XBP1P17861 261 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 KRT2P35908 639 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 KCNJ6P48051 423 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 SLC26A2P50443 739 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 MRPS6P82932 125 aaKnown RBP9.16□□□□□ -0.94
VTI1B-206ENST00000556461 TAP1Q03518 808 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 IKBKEQ14164 716 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 ZNF484Q5JVG2 852 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 FBXO47Q5MNV8 452 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 PPP2R2DQ66LE6 453 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 MOXD1Q6UVY6 613 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 NEK8Q86SG6 692 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 CKAP2LQ8IYA6 745 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 KIAA0319LQ8IZA0 1049 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 USP38Q8NB14 1042 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 LINC01599Q8WXQ3 324 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 WASF1Q92558 559 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 SEPT8Q92599 483 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 HAS1Q92839 578 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 PPP1R16BQ96T49 567 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 TEKT3Q9BXF9 490 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 SLC28A3Q9HAS3 691 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 CDHR5Q9HBB8 845 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 KCNMB3Q9NPA1 279 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 VAV3Q9UKW4 847 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 SAMM50Q9Y512 469 aa9.16□□□□□ -0.94
VTI1B-206ENST00000556461 KAT6AQ92794 2004 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 CUL9Q8IWT3 2517 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 SIP14410 1827 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 SMIM35A0A1B0GVV1 85 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 TLL1O43897 1013 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 CCNT1O60563 726 aaKnown RBP9.15□□□□□ -0.94
VTI1B-206ENST00000556461 GJB5O95377 273 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 OATP04181 439 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 CD52P31358 61 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 PRKCEQ02156 737 aa9.15□□□□□ -0.94
VTI1B-206ENST00000556461 PPP4R3AQ6IN85 833 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms