RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 MSH4O15457 936 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 ZBED4O75132 1171 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 KLRC1P26715 233 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 RXRBP28702 533 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 RDXP35241 583 aaKnown RBP16.19■□□□□ 0.18
NEK9-209ENST00000556170 PRAMEF18Q5VWM3 479 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 LDHDQ86WU2 507 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 FAM71BQ8TC56 605 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 UBE2TQ9NPD8 197 aaPredicted RBP16.19■□□□□ 0.18
NEK9-209ENST00000556170 A0A087X0T9 212 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 FANCGO15287 622 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 FAM228BP0C875 321 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 GGCXP38435 758 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 MCTP2Q6DN12 878 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 GLYCTKQ8IVS8 523 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 SCFD1Q8WVM8 642 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 ZDHHC15Q96MV8 337 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 PKD1L3Q7Z443 1732 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 USP54Q70EL1 1684 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 PSMD14O00487 310 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 BCRP11274 1271 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 GCLMP48507 274 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 PEX3P56589 373 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 MYL7Q01449 175 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 CEP85LQ5SZL2 805 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 ZNF746Q6NUN9 644 aaPredicted RBP16.19■□□□□ 0.18
NEK9-209ENST00000556170 RUSC1Q9BVN2 902 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 DNAJC12Q9UKB3 198 aa16.19■□□□□ 0.18
NEK9-209ENST00000556170 NID2Q14112 1375 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 LRP6O75581 1613 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 FAM86B1E9PN63 330 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 IVLP07476 585 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 FAM86B2P0C5J1 330 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 ZNF507Q8TCN5 953 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 LXNQ9BS40 222 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 FGFBP2Q9BYJ0 223 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 WDR11Q9BZH6 1224 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 REXO2Q9Y3B8 237 aaKnown RBP16.18■□□□□ 0.18
NEK9-209ENST00000556170 ANO9A1A5B4 782 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 MESDQ14696 234 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 CEP55Q53EZ4 464 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 CCDC50Q8IVM0 306 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 CERKQ8TCT0 537 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 DYDC1Q8WWB3 177 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 AGBL1Q96MI9 1066 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 FNBP1Q96RU3 617 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 PACSIN1Q9BY11 444 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 NKRFO15226 690 aaKnown RBP eCLIP16.18■□□□□ 0.18
NEK9-209ENST00000556170 KCNA1Q09470 495 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 BEND6Q5SZJ8 279 aaPredicted RBP16.18■□□□□ 0.18
NEK9-209ENST00000556170 DPH6Q7L8W6 267 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 CCDC26Q8TAB7 109 aa16.18■□□□□ 0.18
NEK9-209ENST00000556170 SIPA1L3O60292 1781 aaPredicted RBP16.17■□□□□ 0.18
NEK9-209ENST00000556170 EBAG9O00559 213 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 NDUFAB1O14561 156 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 LRRC15Q8TF66 581 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 MED4Q9NPJ6 270 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 STK24Q9Y6E0 443 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 UCHL3P15374 230 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 RPA1P27694 616 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 PADI6Q6TGC4 694 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 SCLT1Q96NL6 688 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 TYW1Q9NV66 732 aaKnown RBP16.17■□□□□ 0.18
NEK9-209ENST00000556170 STIM2Q9P246 746 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 CHORDC1Q9UHD1 332 aaPredicted RBP16.17■□□□□ 0.18
NEK9-209ENST00000556170 DMGDHQ9UI17 866 aaKnown RBP16.17■□□□□ 0.18
NEK9-209ENST00000556170 POTEJP0CG39 1038 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 GAP43P17677 238 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 TNNI1P19237 187 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 GNGT1P63211 74 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 FAM198AQ9UFP1 575 aa16.17■□□□□ 0.18
NEK9-209ENST00000556170 ASNSP08243 561 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 CALRP27797 417 aaKnown RBP16.16■□□□□ 0.18
NEK9-209ENST00000556170 CASP5P51878 434 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 PRELPP51888 382 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 PTK2Q05397 1052 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 MIIPQ5JXC2 388 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 TRAPPC11Q7Z392 1133 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 ZNF526Q8TF50 670 aaPredicted RBP16.16■□□□□ 0.18
NEK9-209ENST00000556170 IKZF4Q9H2S9 585 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 CRYBG1Q9Y4K1 1723 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 H3BQF6 201 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 VPS41P49754 854 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 MNAT1P51948 309 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 SPP2Q13103 211 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 DDX47Q9H0S4 455 aaKnown RBP16.16■□□□□ 0.18
NEK9-209ENST00000556170 RBM12Q9NTZ6 932 aaKnown RBP16.16■□□□□ 0.18
NEK9-209ENST00000556170 NUP98P52948 1817 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 POMGNT1Q8WZA1 660 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 USTQ9Y2C2 406 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 STRCP1A6NGW2 1772 aa16.16■□□□□ 0.18
NEK9-209ENST00000556170 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 SLC16A4O15374 487 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 ZBTB7AO95365 584 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 PPFIA1Q13136 1202 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 ZNF211Q13398 564 aaPredicted RBP16.15■□□□□ 0.18
NEK9-209ENST00000556170 DRAP1Q14919 205 aaPredicted RBP16.15■□□□□ 0.18
NEK9-209ENST00000556170 MTMR8Q96EF0 704 aa16.15■□□□□ 0.18
NEK9-209ENST00000556170 SELENOSQ9BQE4 189 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms