RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 KRT76Q01546 638 aa27.71■■■□□ 2.03
PRKCH-216ENST00000555542 TMEM62Q0P6H9 643 aa27.71■■■□□ 2.03
PRKCH-216ENST00000555542 MKRN4PQ13434 485 aaPredicted RBP27.71■■■□□ 2.03
PRKCH-216ENST00000555542 LPIN1Q14693 890 aa27.71■■■□□ 2.03
PRKCH-216ENST00000555542 ZNF746Q6NUN9 644 aaPredicted RBP27.71■■■□□ 2.03
PRKCH-216ENST00000555542 SMAP1Q8IYB5 467 aaPredicted RBP27.71■■■□□ 2.03
PRKCH-216ENST00000555542 ATP8B4Q8TF62 1192 aa27.71■■■□□ 2.03
PRKCH-216ENST00000555542 TGS1Q96RS0 853 aaKnown RBP27.71■■■□□ 2.03
PRKCH-216ENST00000555542 THEGQ9P2T0 379 aa27.71■■■□□ 2.03
PRKCH-216ENST00000555542 PCDHA2Q9Y5H9 948 aa27.71■■■□□ 2.03
PRKCH-216ENST00000555542 LINC01553A4QN01 128 aa27.7■■■□□ 2.02
PRKCH-216ENST00000555542 EIF5BO60841 1220 aaKnown RBP27.7■■■□□ 2.02
PRKCH-216ENST00000555542 PSAPP07602 524 aa27.7■■■□□ 2.02
PRKCH-216ENST00000555542 SCRN1Q12765 414 aa27.7■■■□□ 2.02
PRKCH-216ENST00000555542 TRMT1LQ7Z2T5 733 aaKnown RBP27.7■■■□□ 2.02
PRKCH-216ENST00000555542 BLIDQ8IZY5 108 aa27.7■■■□□ 2.02
PRKCH-216ENST00000555542 TBCKQ8TEA7 893 aa27.7■■■□□ 2.02
PRKCH-216ENST00000555542 MTCH2Q9Y6C9 303 aa27.7■■■□□ 2.02
PRKCH-216ENST00000555542 COL4A4P53420 1690 aaPredicted RBP27.7■■■□□ 2.02
PRKCH-216ENST00000555542 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.69■■■□□ 2.02
PRKCH-216ENST00000555542 USP11P51784 963 aa27.69■■■□□ 2.02
PRKCH-216ENST00000555542 GRB10Q13322 594 aa27.69■■■□□ 2.02
PRKCH-216ENST00000555542 ANKRD1Q15327 319 aa27.69■■■□□ 2.02
PRKCH-216ENST00000555542 FBXO47Q5MNV8 452 aa27.69■■■□□ 2.02
PRKCH-216ENST00000555542 MTHFD1LQ6UB35 978 aa27.69■■■□□ 2.02
PRKCH-216ENST00000555542 TSHZ1Q6ZSZ6 1077 aa27.69■■■□□ 2.02
PRKCH-216ENST00000555542 TOP1MTQ969P6 601 aa27.69■■■□□ 2.02
PRKCH-216ENST00000555542 AIFM3Q96NN9 605 aa27.69■■■□□ 2.02
PRKCH-216ENST00000555542 PCDHA10Q9Y5I2 948 aa27.69■■■□□ 2.02
PRKCH-216ENST00000555542 TRPV2Q9Y5S1 764 aa27.69■■■□□ 2.02
PRKCH-216ENST00000555542 MYH9P35579 1960 aaKnown RBP27.69■■■□□ 2.02
PRKCH-216ENST00000555542 KLRC1P26715 233 aa27.68■■■□□ 2.02
PRKCH-216ENST00000555542 GDPD5Q8WTR4 605 aa27.68■■■□□ 2.02
PRKCH-216ENST00000555542 TPCN1Q9ULQ1 816 aa27.68■■■□□ 2.02
PRKCH-216ENST00000555542 PRUNE2Q8WUY3 3088 aa27.67■■■□□ 2.02
PRKCH-216ENST00000555542 SMIM35A0A1B0GVV1 85 aa27.67■■■□□ 2.02
PRKCH-216ENST00000555542 XBP1P17861 261 aa27.67■■■□□ 2.02
PRKCH-216ENST00000555542 ERVK-21P61565 698 aa27.67■■■□□ 2.02
PRKCH-216ENST00000555542 HTRA4P83105 476 aaPredicted RBP27.67■■■□□ 2.02
PRKCH-216ENST00000555542 ZNF484Q5JVG2 852 aa27.67■■■□□ 2.02
PRKCH-216ENST00000555542 KRT40Q6A162 431 aa27.67■■■□□ 2.02
PRKCH-216ENST00000555542 GALNT17Q6IS24 598 aa27.67■■■□□ 2.02
PRKCH-216ENST00000555542 SYMPKQ92797 1274 aaKnown RBP27.67■■■□□ 2.02
PRKCH-216ENST00000555542 LENG9Q96B70 501 aa27.67■■■□□ 2.02
PRKCH-216ENST00000555542 GABBR1Q9UBS5 961 aa27.67■■■□□ 2.02
PRKCH-216ENST00000555542 COL1A2P08123 1366 aa27.67■■■□□ 2.02
PRKCH-216ENST00000555542 CHD7Q9P2D1 2997 aa27.67■■■□□ 2.02
PRKCH-216ENST00000555542 WDR64B1ANS9 1081 aa27.66■■■□□ 2.02
PRKCH-216ENST00000555542 MSH4O15457 936 aa27.66■■■□□ 2.02
PRKCH-216ENST00000555542 CHMP2AO43633 222 aa27.66■■■□□ 2.02
PRKCH-216ENST00000555542 GAS7O60861 476 aa27.66■■■□□ 2.02
PRKCH-216ENST00000555542 AK2P54819 239 aa27.66■■■□□ 2.02
PRKCH-216ENST00000555542 TJAP1Q5JTD0 557 aa27.66■■■□□ 2.02
PRKCH-216ENST00000555542 FAM177A1Q8N128 213 aaPredicted RBP27.66■■■□□ 2.02
PRKCH-216ENST00000555542 NME8Q8N427 588 aa27.66■■■□□ 2.02
PRKCH-216ENST00000555542 DAGLBQ8NCG7 672 aa27.66■■■□□ 2.02
PRKCH-216ENST00000555542 ATXN2LQ8WWM7 1075 aaKnown RBP27.66■■■□□ 2.02
PRKCH-216ENST00000555542 BBXQ8WY36 941 aaPredicted RBP27.66■■■□□ 2.02
PRKCH-216ENST00000555542 GINS2Q9Y248 185 aa27.66■■■□□ 2.02
PRKCH-216ENST00000555542 PFKFB2O60825 505 aa27.65■■■□□ 2.02
PRKCH-216ENST00000555542 POU3F3P20264 500 aaPredicted RBP27.65■■■□□ 2.02
PRKCH-216ENST00000555542 CD52P31358 61 aa27.65■■■□□ 2.02
PRKCH-216ENST00000555542 LRCH2Q5VUJ6 765 aa27.65■■■□□ 2.02
PRKCH-216ENST00000555542 IL27Q8NEV9 243 aa27.65■■■□□ 2.02
PRKCH-216ENST00000555542 TEKT3Q9BXF9 490 aa27.65■■■□□ 2.02
PRKCH-216ENST00000555542 CELF4Q9BZC1 486 aaKnown RBP27.65■■■□□ 2.02
PRKCH-216ENST00000555542 KCNJ14Q9UNX9 436 aa27.65■■■□□ 2.02
PRKCH-216ENST00000555542 MAFBQ9Y5Q3 323 aaPredicted RBP27.65■■■□□ 2.02
PRKCH-216ENST00000555542 PAK2Q13177 524 aa27.64■■■□□ 2.02
PRKCH-216ENST00000555542 NONOQ15233 471 aaKnown RBP eCLIP27.64■■■□□ 2.02
PRKCH-216ENST00000555542 FBXO22Q8NEZ5 403 aa27.64■■■□□ 2.02
PRKCH-216ENST00000555542 RIT2Q99578 217 aa27.64■■■□□ 2.02
PRKCH-216ENST00000555542 C17orf80Q9BSJ5 609 aa27.64■■■□□ 2.02
PRKCH-216ENST00000555542 AGO3Q9H9G7 860 aaKnown RBP27.64■■■□□ 2.02
PRKCH-216ENST00000555542 SUGCTQ9HAC7 445 aa27.64■■■□□ 2.02
PRKCH-216ENST00000555542 DISC1Q9NRI5 854 aa27.64■■■□□ 2.02
PRKCH-216ENST00000555542 CEP131Q9UPN4 1083 aa27.64■■■□□ 2.02
PRKCH-216ENST00000555542 LOXHD1Q8IVV2 1947 aa27.64■■■□□ 2.02
PRKCH-216ENST00000555542 STK36Q9NRP7 1315 aa27.64■■■□□ 2.01
PRKCH-216ENST00000555542 TDP2O95551 362 aa27.63■■■□□ 2.01
PRKCH-216ENST00000555542 ATP4AP20648 1035 aa27.63■■■□□ 2.01
PRKCH-216ENST00000555542 KRT25Q7Z3Z0 450 aa27.63■■■□□ 2.01
PRKCH-216ENST00000555542 SP7Q8TDD2 431 aaPredicted RBP27.63■■■□□ 2.01
PRKCH-216ENST00000555542 FAM167AQ96KS9 214 aa27.63■■■□□ 2.01
PRKCH-216ENST00000555542 SQORQ9Y6N5 450 aa27.63■■■□□ 2.01
PRKCH-216ENST00000555542 CCDC194A0A1B0GVG4 234 aa27.62■■■□□ 2.01
PRKCH-216ENST00000555542 LPXNO60711 386 aa27.62■■■□□ 2.01
PRKCH-216ENST00000555542 MRPS5P82675 430 aaKnown RBP27.62■■■□□ 2.01
PRKCH-216ENST00000555542 METTL13Q8N6R0 699 aa27.62■■■□□ 2.01
PRKCH-216ENST00000555542 SLC5A5Q92911 643 aa27.62■■■□□ 2.01
PRKCH-216ENST00000555542 GJA10Q969M2 543 aa27.62■■■□□ 2.01
PRKCH-216ENST00000555542 IL17RAQ96F46 866 aa27.62■■■□□ 2.01
PRKCH-216ENST00000555542 SAMD11Q96NU1 681 aa27.62■■■□□ 2.01
PRKCH-216ENST00000555542 FTHL17Q9BXU8 183 aa27.62■■■□□ 2.01
PRKCH-216ENST00000555542 IGSF9BQ9UPX0 1349 aa27.62■■■□□ 2.01
PRKCH-216ENST00000555542 A0A0C4DFX4 3053 aa27.61■■■□□ 2.01
PRKCH-216ENST00000555542 PRRC2BQ5JSZ5 2229 aaKnown RBP27.61■■■□□ 2.01
PRKCH-216ENST00000555542 M0R2N6 131 aa27.61■■■□□ 2.01
PRKCH-216ENST00000555542 ENPP3O14638 875 aa27.61■■■□□ 2.01
PRKCH-216ENST00000555542 EDIL3O43854 480 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms